Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 KCNMA1-245ENST00000638759 3723 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 KCNMA1-264ENST00000639544 3711 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SNX18Q96RF0 THBS4-204ENST00000511733 3094 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 TRPC3-201ENST00000264811 3675 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 TTLL5-201ENST00000286650 1595 ntTSL 2 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 MED23-205ENST00000368068 5233 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 NCALD-212ENST00000519508 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 RPGRIP1L-210ENST00000568653 2429 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AC018521.7-201ENST00000580282 2927 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 CLTCL1-211ENST00000621271 5313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 CCT5P1-201ENST00000502314 1618 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 AC023824.7-201ENST00000623041 5731 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 LAMTOR2-202ENST00000368304 521 ntTSL 2 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 APH1B-203ENST00000380343 685 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AC078883.3-202ENST00000417539 754 ntTSL 3 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 UBTFL7-201ENST00000418789 1191 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 LYG2-205ENST00000423800 766 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AL137022.1-201ENST00000424386 392 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 RPL36AP35-201ENST00000426082 308 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 TPTE2P1-202ENST00000429698 770 ntTSL 3 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AC024937.1-201ENST00000429793 344 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 AC078842.1-201ENST00000438969 553 ntTSL 4 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 ST13P4-201ENST00000495613 1093 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 AC139887.2-203ENST00000503185 618 ntTSL 2 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AC139887.2-204ENST00000503405 550 ntTSL 3 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 LINC02214-201ENST00000504419 707 ntTSL 3 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AC108865.1-201ENST00000507644 496 ntTSL 3 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 CASP12-211ENST00000508062 774 ntTSL 5 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AC094104.1-201ENST00000515822 584 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 AC104561.2-201ENST00000523257 519 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 AL050327.1-201ENST00000525424 507 ntTSL 4 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AP000785.2-201ENST00000531538 388 ntTSL 3 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 SEBOX-201ENST00000536498 666 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AL132780.3-201ENST00000555074 835 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 GRAMD4P5-201ENST00000557243 761 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 MIR762HG-202ENST00000565573 1125 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AC010186.4-201ENST00000573622 615 ntTSL 3 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 HCFC1R1-206ENST00000574151 618 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 SUPT4H1-204ENST00000580947 574 ntAPPRIS P1 TSL 4 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AC025884.3-201ENST00000605422 343 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 GAGE1-203ENST00000610680 564 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AL162390.1-201ENST00000622201 1246 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 AL021920.3-201ENST00000633433 819 ntTSL 3 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 ZNF662-204ENST00000440367 4099 ntTSL 2 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 DDR1-AS1-206ENST00000458361 3994 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 CCDC181-207ENST00000545005 2035 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 ZNF3-205ENST00000413658 1441 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AP003035.1-201ENST00000533748 1417 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AC109449.1-201ENST00000567108 1686 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AL662907.3-201ENST00000641271 1932 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 LINC02192-201ENST00000570024 1325 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 PNPLA8-201ENST00000257694 3490 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNX18Q96RF0 C20orf197-201ENST00000625080 2732 ntTSL 2 BASIC9.03□□□□□ -0.96
SNX18Q96RF0 AP002847.1-201ENST00000625136 2245 ntBASIC9.03□□□□□ -0.96
SNX18Q96RF0 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
SNX18Q96RF0 SERPINA12-202ENST00000556881 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
SNX18Q96RF0 KLKB1-201ENST00000264690 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
SNX18Q96RF0 AP3B2-209ENST00000542200 3921 ntTSL 2 BASIC9.02□□□□□ -0.96
SNX18Q96RF0 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
SNX18Q96RF0 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
SNX18Q96RF0 PTGS1-203ENST00000373698 4987 ntTSL 2 BASIC9.02□□□□□ -0.96
SNX18Q96RF0 PDE9A-204ENST00000335512 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
SNX18Q96RF0 CACNB4-202ENST00000360283 1885 ntTSL 5 BASIC9.02□□□□□ -0.96
SNX18Q96RF0 CAMK2D-203ENST00000379773 1642 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
SNX18Q96RF0 KIF9-AS1-201ENST00000429315 4898 ntTSL 2 BASIC9.02□□□□□ -0.96
SNX18Q96RF0 CYBRD1-201ENST00000321348 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 ZNF619-210ENST00000522736 2030 ntTSL 5 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 FAM193A-204ENST00000505311 4110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 ALDH6A1-206ENST00000555126 1382 ntTSL 2 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 CALD1-201ENST00000361675 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 SERPINB3-202ENST00000332821 1541 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 MYOCOS-204ENST00000637642 1549 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 C11orf57-203ENST00000420986 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 NHLRC3-202ENST00000379600 3549 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 SIRPB1-201ENST00000262929 1659 ntTSL 5 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 SNORA5C-201ENST00000364902 137 ntBASIC9.02□□□□□ -0.97
SNX18Q96RF0 HSD17B7-203ENST00000367915 507 ntTSL 2 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 GPR21-201ENST00000373642 1170 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 TLE1-201ENST00000376463 1115 ntTSL 2 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 KRTAP20-3-201ENST00000382826 273 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 RPS14P4-201ENST00000415880 418 ntBASIC9.02□□□□□ -0.97
SNX18Q96RF0 AL355304.1-201ENST00000417650 554 ntTSL 3 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 AL450309.1-201ENST00000423792 656 ntBASIC9.02□□□□□ -0.97
SNX18Q96RF0 OR8C1P-201ENST00000427511 925 ntBASIC9.02□□□□□ -0.97
SNX18Q96RF0 AC062020.1-201ENST00000435441 801 ntTSL 3 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 AL109613.1-205ENST00000446684 714 ntTSL 3 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 GAPDHP52-201ENST00000449535 942 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms