Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 URM1-204ENST00000452446 2944 ntTSL 2 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 UPF3B-201ENST00000276201 2378 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 SEMA4G-202ENST00000370250 3596 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 PSMD2-206ENST00000439383 2633 ntTSL 2 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 BORA-206ENST00000613797 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 ARL17A-201ENST00000329240 543 ntAPPRIS ALT2 TSL 4 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 RN7SKP45-201ENST00000363509 304 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 RN7SKP246-201ENST00000364553 317 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 C1orf146-202ENST00000370375 830 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 IL31-201ENST00000377035 904 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 CEBPZOS-202ENST00000397064 568 ntAPPRIS P1 TSL 4 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 AL391416.1-201ENST00000403475 994 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 AC103563.8-201ENST00000415716 318 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 ZNF70P1-201ENST00000417480 624 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 IFNWP18-201ENST00000437472 591 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 AP002381.1-201ENST00000439829 615 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 AL512353.1-203ENST00000444563 610 ntTSL 2 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 AL606468.1-201ENST00000444750 510 ntTSL 3 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 IFNWP9-201ENST00000448683 591 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 RPSAP18-201ENST00000453374 886 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 ACPP-203ENST00000475741 1242 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 PFN1P9-201ENST00000475753 433 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 AC120193.1-204ENST00000519689 651 ntTSL 4 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 LDHC-208ENST00000544105 875 ntTSL 5 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 LDHC-210ENST00000546146 701 ntTSL 5 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 AC009081.1-201ENST00000567862 565 ntTSL 4 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 AC004448.4-211ENST00000582654 485 ntTSL 3 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 AC103810.1-203ENST00000583052 599 ntTSL 4 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 ZNF506-207ENST00000587461 831 ntTSL 3 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 LINC00868-201ENST00000589708 547 ntTSL 3 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 FAM95B1-210ENST00000591605 743 ntTSL 5 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 ZNF415-223ENST00000601215 561 ntTSL 4 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 RN7SKP290-201ENST00000606842 195 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 Metazoa_SRP.140-201ENST00000613842 252 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 AC244517.8-201ENST00000623995 467 ntTSL 4 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 Metazoa_SRP.208-201ENST00000629083 297 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 AL357143.2-201ENST00000640266 421 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 HIPK1-203ENST00000369553 2883 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 ZNF300-201ENST00000274599 3268 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 POLR3G-201ENST00000399107 3285 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 RRP12-211ENST00000536831 4476 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 NLRP12-202ENST00000345770 3547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 GYS1-201ENST00000263276 3378 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 PLD2-205ENST00000572940 3391 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 SLC4A1AP-204ENST00000613058 2966 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 MLH1-221ENST00000536378 2567 ntTSL 2 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 DLG3-210ENST00000542398 4529 ntTSL 2 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 CHST4-201ENST00000338482 2412 ntAPPRIS P1 TSL 4 BASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 AL157815.1-201ENST00000635484 2117 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 AC104394.1-201ENST00000611658 1748 ntBASIC10.36□□□□□ -0.75
SYCE2Q6PIF2 CPVL-203ENST00000409850 2213 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 APOBEC3G-201ENST00000407997 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 CCR9-202ENST00000357632 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 EXD2-205ENST00000409675 2828 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 ZNF682-202ENST00000397162 3164 ntTSL 4 BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 TTC39A-201ENST00000262675 2173 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 GNPDA2-201ENST00000295448 1930 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 CLEC4M-202ENST00000327325 1935 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 SERPINA9-201ENST00000298845 1423 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 PCDHGA1-202ENST00000517417 4604 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 EIF2D-201ENST00000271764 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 TOP3A-201ENST00000321105 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 IL37-201ENST00000263326 772 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 KRTDAP-201ENST00000338897 491 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 IL19-202ENST00000340758 1032 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 MCOLN3-202ENST00000370587 2953 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 LCN2-202ENST00000372998 631 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 SCMH1-209ENST00000397174 2977 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 KRTAP9-1-201ENST00000398470 753 ntBASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 RNU4-86P-201ENST00000410135 219 ntBASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 RNA5SP158-201ENST00000410298 102 ntBASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 PMP22-204ENST00000426385 571 ntTSL 2 BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 KRTDAP-203ENST00000484218 451 ntTSL 2 BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 AC233724.8-201ENST00000504574 234 ntBASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 TMEM161B-207ENST00000509387 963 ntTSL 2 BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 AC233724.3-201ENST00000512613 128 ntBASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 LINCR-0001-201ENST00000517732 562 ntTSL 4 BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 AC117372.1-201ENST00000548633 620 ntBASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 RRN3P1-203ENST00000551681 1151 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 CRADD-211ENST00000552983 839 ntTSL 5 BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 LINC01571-201ENST00000563603 811 ntTSL 2 BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 CDRT7-201ENST00000568256 767 ntTSL 3 BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 AL139098.2-201ENST00000608233 381 ntBASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 RN7SL462P-201ENST00000610302 261 ntBASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 RN7SL422P-201ENST00000612850 261 ntBASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 Metazoa_SRP.119-201ENST00000613387 291 ntBASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 AL158077.1-201ENST00000616744 174 ntBASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 RPS20-212ENST00000618656 627 ntTSL 3 BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 RN7SL343P-201ENST00000620904 261 ntBASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 AC108125.1-201ENST00000622310 543 ntBASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 RN7SL640P-201ENST00000622591 261 ntBASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 LINC01320-209ENST00000625995 928 ntTSL 5 BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 KRTAP9-1-202ENST00000634235 351 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 TOGARAM1-202ENST00000361577 6247 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 CMTR1-201ENST00000373451 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 AC013643.3-201ENST00000623825 2596 ntBASIC10.35□□□□□ -0.75
SYCE2Q6PIF2 EEF1A1P19-201ENST00000513637 1382 ntBASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms