Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
PTCH2Q9Y6C5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.67■■□□□ 1.38
PTCH2Q9Y6C5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
PTCH2Q9Y6C5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.67■■□□□ 1.38
PTCH2Q9Y6C5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PTCH2Q9Y6C5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCH2Q9Y6C5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PTCH2Q9Y6C5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PTCH2Q9Y6C5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PTCH2Q9Y6C5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCH2Q9Y6C5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCH2Q9Y6C5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC23.65■■□□□ 1.38
PTCH2Q9Y6C5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.65■■□□□ 1.38
PTCH2Q9Y6C5 AC245052.3-201ENST00000450182 901 ntBASIC23.65■■□□□ 1.38
PTCH2Q9Y6C5 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.65■■□□□ 1.38
PTCH2Q9Y6C5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCH2Q9Y6C5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.65■■□□□ 1.38
PTCH2Q9Y6C5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.65■■□□□ 1.38
PTCH2Q9Y6C5 AL353708.3-201ENST00000610272 989 ntBASIC23.65■■□□□ 1.38
PTCH2Q9Y6C5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PTCH2Q9Y6C5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PTCH2Q9Y6C5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
PTCH2Q9Y6C5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PTCH2Q9Y6C5 PRKY-204ENST00000533551 1019 ntBASIC23.64■■□□□ 1.37
PTCH2Q9Y6C5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.64■■□□□ 1.37
PTCH2Q9Y6C5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PTCH2Q9Y6C5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PTCH2Q9Y6C5 AC092068.2-201ENST00000590491 1708 ntBASIC23.64■■□□□ 1.37
PTCH2Q9Y6C5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTCH2Q9Y6C5 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTCH2Q9Y6C5 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTCH2Q9Y6C5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 AC110285.5-201ENST00000611501 352 ntBASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCH2Q9Y6C5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 KRASP1-201ENST00000407852 552 ntBASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 AL049597.2-201ENST00000565575 961 ntBASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCH2Q9Y6C5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PTCH2Q9Y6C5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.61■■□□□ 1.37
PTCH2Q9Y6C5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.61■■□□□ 1.37
PTCH2Q9Y6C5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.61■■□□□ 1.37
PTCH2Q9Y6C5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC23.61■■□□□ 1.37
PTCH2Q9Y6C5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PTCH2Q9Y6C5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.61■■□□□ 1.37
PTCH2Q9Y6C5 AL590326.2-201ENST00000625139 305 ntBASIC23.61■■□□□ 1.37
PTCH2Q9Y6C5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms