Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AP005212.1-201ENST00000581547 1997 ntBASIC23.73■■□□□ 1.39
CLIC4Q9Y696 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLIC4Q9Y696 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLIC4Q9Y696 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.73■■□□□ 1.39
CLIC4Q9Y696 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLIC4Q9Y696 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLIC4Q9Y696 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLIC4Q9Y696 LINC02228-203ENST00000641970 1355 ntBASIC23.73■■□□□ 1.39
CLIC4Q9Y696 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.73■■□□□ 1.39
CLIC4Q9Y696 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.73■■□□□ 1.39
CLIC4Q9Y696 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLIC4Q9Y696 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CLIC4Q9Y696 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLIC4Q9Y696 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CLIC4Q9Y696 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLIC4Q9Y696 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.72■■□□□ 1.39
CLIC4Q9Y696 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLIC4Q9Y696 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLIC4Q9Y696 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLIC4Q9Y696 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLIC4Q9Y696 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
CLIC4Q9Y696 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CLIC4Q9Y696 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLIC4Q9Y696 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.72■■□□□ 1.39
CLIC4Q9Y696 AC007225.1-201ENST00000566331 1836 ntBASIC23.71■■□□□ 1.39
CLIC4Q9Y696 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLIC4Q9Y696 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.71■■□□□ 1.39
CLIC4Q9Y696 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLIC4Q9Y696 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.71■■□□□ 1.39
CLIC4Q9Y696 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.71■■□□□ 1.39
CLIC4Q9Y696 AC138907.5-202ENST00000569484 235 ntBASIC23.71■■□□□ 1.39
CLIC4Q9Y696 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CLIC4Q9Y696 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CLIC4Q9Y696 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CLIC4Q9Y696 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.7■■□□□ 1.38
CLIC4Q9Y696 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CLIC4Q9Y696 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CLIC4Q9Y696 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CLIC4Q9Y696 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLIC4Q9Y696 ZNRF2P3-201ENST00000424200 374 ntBASIC23.7■■□□□ 1.38
CLIC4Q9Y696 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.7■■□□□ 1.38
CLIC4Q9Y696 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.7■■□□□ 1.38
CLIC4Q9Y696 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLIC4Q9Y696 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLIC4Q9Y696 AC027702.1-201ENST00000563810 1770 ntBASIC23.7■■□□□ 1.38
CLIC4Q9Y696 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLIC4Q9Y696 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.69■■□□□ 1.38
CLIC4Q9Y696 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLIC4Q9Y696 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLIC4Q9Y696 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLIC4Q9Y696 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.69■■□□□ 1.38
CLIC4Q9Y696 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLIC4Q9Y696 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLIC4Q9Y696 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.69■■□□□ 1.38
CLIC4Q9Y696 POU5F1P4-201ENST00000413175 1085 ntBASIC23.69■■□□□ 1.38
CLIC4Q9Y696 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.69■■□□□ 1.38
CLIC4Q9Y696 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.69■■□□□ 1.38
CLIC4Q9Y696 AC008175.2-201ENST00000612840 297 ntBASIC23.69■■□□□ 1.38
CLIC4Q9Y696 RARRES2P11-201ENST00000635158 484 ntBASIC23.69■■□□□ 1.38
CLIC4Q9Y696 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
CLIC4Q9Y696 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLIC4Q9Y696 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLIC4Q9Y696 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLIC4Q9Y696 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLIC4Q9Y696 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 TERF1P2-201ENST00000583350 1212 ntBASIC23.68■■□□□ 1.38
CLIC4Q9Y696 AC104187.1-201ENST00000607510 612 ntBASIC23.68■■□□□ 1.38
CLIC4Q9Y696 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLIC4Q9Y696 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
CLIC4Q9Y696 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLIC4Q9Y696 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLIC4Q9Y696 GABARAPL3-202ENST00000624044 1851 ntBASIC23.67■■□□□ 1.38
CLIC4Q9Y696 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLIC4Q9Y696 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.67■■□□□ 1.38
CLIC4Q9Y696 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.67■■□□□ 1.38
CLIC4Q9Y696 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLIC4Q9Y696 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
CLIC4Q9Y696 AC123595.1-201ENST00000440769 1046 ntBASIC23.67■■□□□ 1.38
CLIC4Q9Y696 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLIC4Q9Y696 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.67■■□□□ 1.38
CLIC4Q9Y696 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms