Protein–RNA interactions for Protein: Q9Y4G8

RAPGEF2, Rap guanine nucleotide exchange factor 2, humanhuman

Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF2Q9Y4G8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
RAPGEF2Q9Y4G8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
RAPGEF2Q9Y4G8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC34.06■■■■□ 3.04
RAPGEF2Q9Y4G8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC34.06■■■■□ 3.04
RAPGEF2Q9Y4G8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC34.06■■■■□ 3.04
RAPGEF2Q9Y4G8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
RAPGEF2Q9Y4G8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC34.06■■■■□ 3.04
RAPGEF2Q9Y4G8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC34.06■■■■□ 3.04
RAPGEF2Q9Y4G8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC34.06■■■■□ 3.04
RAPGEF2Q9Y4G8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC34.06■■■■□ 3.04
RAPGEF2Q9Y4G8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC34.06■■■■□ 3.04
RAPGEF2Q9Y4G8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC34.06■■■■□ 3.04
RAPGEF2Q9Y4G8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
RAPGEF2Q9Y4G8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
RAPGEF2Q9Y4G8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
RAPGEF2Q9Y4G8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
RAPGEF2Q9Y4G8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
RAPGEF2Q9Y4G8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC34.05■■■■□ 3.04
RAPGEF2Q9Y4G8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC34.05■■■■□ 3.04
RAPGEF2Q9Y4G8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC34.05■■■■□ 3.04
RAPGEF2Q9Y4G8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC34.04■■■■□ 3.04
RAPGEF2Q9Y4G8 AC242852.2-201ENST00000615738 1807 ntBASIC34.04■■■■□ 3.04
RAPGEF2Q9Y4G8 AC007322.3-201ENST00000426526 701 ntBASIC34.04■■■■□ 3.04
RAPGEF2Q9Y4G8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC34.04■■■■□ 3.04
RAPGEF2Q9Y4G8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC34.04■■■■□ 3.04
RAPGEF2Q9Y4G8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
RAPGEF2Q9Y4G8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
RAPGEF2Q9Y4G8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
RAPGEF2Q9Y4G8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
RAPGEF2Q9Y4G8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC34.03■■■■□ 3.04
RAPGEF2Q9Y4G8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC34.03■■■■□ 3.04
RAPGEF2Q9Y4G8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC34.03■■■■□ 3.04
RAPGEF2Q9Y4G8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC34.03■■■■□ 3.04
RAPGEF2Q9Y4G8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC34.03■■■■□ 3.04
RAPGEF2Q9Y4G8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC34.03■■■■□ 3.04
RAPGEF2Q9Y4G8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC34.03■■■■□ 3.04
RAPGEF2Q9Y4G8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
RAPGEF2Q9Y4G8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
RAPGEF2Q9Y4G8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC34.02■■■■□ 3.04
RAPGEF2Q9Y4G8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
RAPGEF2Q9Y4G8 RPS2P4-201ENST00000476944 856 ntBASIC34.02■■■■□ 3.04
RAPGEF2Q9Y4G8 SLC29A4P2-201ENST00000504749 1089 ntBASIC34.02■■■■□ 3.04
RAPGEF2Q9Y4G8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
RAPGEF2Q9Y4G8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
RAPGEF2Q9Y4G8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
RAPGEF2Q9Y4G8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
RAPGEF2Q9Y4G8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC34.02■■■■□ 3.04
RAPGEF2Q9Y4G8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
RAPGEF2Q9Y4G8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC34.01■■■■□ 3.04
RAPGEF2Q9Y4G8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC34.01■■■■□ 3.04
RAPGEF2Q9Y4G8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC34.01■■■■□ 3.04
RAPGEF2Q9Y4G8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC34.01■■■■□ 3.04
RAPGEF2Q9Y4G8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC34.01■■■■□ 3.04
RAPGEF2Q9Y4G8 GUSBP5-202ENST00000510805 1989 ntBASIC34.01■■■■□ 3.04
RAPGEF2Q9Y4G8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC34.01■■■■□ 3.04
RAPGEF2Q9Y4G8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC34.01■■■■□ 3.04
RAPGEF2Q9Y4G8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC34.01■■■■□ 3.04
RAPGEF2Q9Y4G8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC34.01■■■■□ 3.03
RAPGEF2Q9Y4G8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC34.01■■■■□ 3.03
RAPGEF2Q9Y4G8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC34.01■■■■□ 3.03
RAPGEF2Q9Y4G8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC34.01■■■■□ 3.03
RAPGEF2Q9Y4G8 CYP21A1P-202ENST00000354927 1481 ntBASIC34.01■■■■□ 3.03
RAPGEF2Q9Y4G8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
RAPGEF2Q9Y4G8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC34■■■■□ 3.03
RAPGEF2Q9Y4G8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC34■■■■□ 3.03
RAPGEF2Q9Y4G8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC34■■■■□ 3.03
RAPGEF2Q9Y4G8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC34■■■■□ 3.03
RAPGEF2Q9Y4G8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC34■■■■□ 3.03
RAPGEF2Q9Y4G8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC34■■■■□ 3.03
RAPGEF2Q9Y4G8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC34■■■■□ 3.03
RAPGEF2Q9Y4G8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC34■■■■□ 3.03
RAPGEF2Q9Y4G8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC34■■■■□ 3.03
RAPGEF2Q9Y4G8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC34■■■■□ 3.03
RAPGEF2Q9Y4G8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
RAPGEF2Q9Y4G8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC33.99■■■■□ 3.03
RAPGEF2Q9Y4G8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
RAPGEF2Q9Y4G8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
RAPGEF2Q9Y4G8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC33.99■■■■□ 3.03
RAPGEF2Q9Y4G8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
RAPGEF2Q9Y4G8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
RAPGEF2Q9Y4G8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC33.99■■■■□ 3.03
RAPGEF2Q9Y4G8 AC008550.1-201ENST00000511500 884 ntBASIC33.99■■■■□ 3.03
RAPGEF2Q9Y4G8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC33.99■■■■□ 3.03
RAPGEF2Q9Y4G8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC33.99■■■■□ 3.03
RAPGEF2Q9Y4G8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
RAPGEF2Q9Y4G8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC33.98■■■■□ 3.03
RAPGEF2Q9Y4G8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
RAPGEF2Q9Y4G8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC33.98■■■■□ 3.03
RAPGEF2Q9Y4G8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
RAPGEF2Q9Y4G8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
RAPGEF2Q9Y4G8 AC105020.6-201ENST00000621523 1217 ntBASIC33.98■■■■□ 3.03
RAPGEF2Q9Y4G8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC33.98■■■■□ 3.03
RAPGEF2Q9Y4G8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC33.98■■■■□ 3.03
RAPGEF2Q9Y4G8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
RAPGEF2Q9Y4G8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
RAPGEF2Q9Y4G8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC33.97■■■■□ 3.03
RAPGEF2Q9Y4G8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
RAPGEF2Q9Y4G8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC33.97■■■■□ 3.03
RAPGEF2Q9Y4G8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC33.97■■■■□ 3.03
RAPGEF2Q9Y4G8 AC233263.1-201ENST00000578059 224 ntBASIC33.97■■■■□ 3.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms