Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PKP3Q9Y446 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PKP3Q9Y446 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP3Q9Y446 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP3Q9Y446 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.85■□□□□ 0.93
PKP3Q9Y446 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.85■□□□□ 0.93
PKP3Q9Y446 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP3Q9Y446 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.85■□□□□ 0.93
PKP3Q9Y446 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP3Q9Y446 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.85■□□□□ 0.93
PKP3Q9Y446 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PKP3Q9Y446 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP3Q9Y446 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PKP3Q9Y446 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.85■□□□□ 0.93
PKP3Q9Y446 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.85■□□□□ 0.93
PKP3Q9Y446 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PKP3Q9Y446 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PKP3Q9Y446 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PKP3Q9Y446 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.84■□□□□ 0.93
PKP3Q9Y446 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PKP3Q9Y446 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PKP3Q9Y446 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.84■□□□□ 0.93
PKP3Q9Y446 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.84■□□□□ 0.93
PKP3Q9Y446 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.84■□□□□ 0.93
PKP3Q9Y446 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.84■□□□□ 0.93
PKP3Q9Y446 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.84■□□□□ 0.93
PKP3Q9Y446 MYCNOS-205ENST00000641950 531 ntBASIC20.84■□□□□ 0.93
PKP3Q9Y446 AC005229.4-201ENST00000610085 2198 ntBASIC20.84■□□□□ 0.93
PKP3Q9Y446 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PKP3Q9Y446 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PKP3Q9Y446 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PKP3Q9Y446 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PKP3Q9Y446 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.84■□□□□ 0.93
PKP3Q9Y446 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PKP3Q9Y446 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PKP3Q9Y446 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PKP3Q9Y446 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PKP3Q9Y446 AL137060.1-201ENST00000618151 2648 ntBASIC20.83■□□□□ 0.93
PKP3Q9Y446 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PKP3Q9Y446 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PKP3Q9Y446 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PKP3Q9Y446 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PKP3Q9Y446 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PKP3Q9Y446 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.83■□□□□ 0.93
PKP3Q9Y446 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
PKP3Q9Y446 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.83■□□□□ 0.93
PKP3Q9Y446 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.83■□□□□ 0.93
PKP3Q9Y446 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.83■□□□□ 0.93
PKP3Q9Y446 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.83■□□□□ 0.93
PKP3Q9Y446 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PKP3Q9Y446 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PKP3Q9Y446 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PKP3Q9Y446 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PKP3Q9Y446 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.83■□□□□ 0.92
PKP3Q9Y446 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PKP3Q9Y446 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PKP3Q9Y446 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PKP3Q9Y446 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PKP3Q9Y446 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PKP3Q9Y446 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PKP3Q9Y446 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PKP3Q9Y446 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.82■□□□□ 0.92
PKP3Q9Y446 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.82■□□□□ 0.92
PKP3Q9Y446 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.82■□□□□ 0.92
PKP3Q9Y446 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.82■□□□□ 0.92
PKP3Q9Y446 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.82■□□□□ 0.92
PKP3Q9Y446 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PKP3Q9Y446 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.82■□□□□ 0.92
PKP3Q9Y446 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PKP3Q9Y446 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PKP3Q9Y446 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PKP3Q9Y446 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PKP3Q9Y446 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PKP3Q9Y446 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PKP3Q9Y446 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PKP3Q9Y446 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PKP3Q9Y446 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PKP3Q9Y446 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.81■□□□□ 0.92
PKP3Q9Y446 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PKP3Q9Y446 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PKP3Q9Y446 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PKP3Q9Y446 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.81■□□□□ 0.92
PKP3Q9Y446 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
PKP3Q9Y446 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PKP3Q9Y446 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.81■□□□□ 0.92
PKP3Q9Y446 AC022517.1-201ENST00000592429 346 ntBASIC20.81■□□□□ 0.92
PKP3Q9Y446 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PKP3Q9Y446 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
PKP3Q9Y446 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PKP3Q9Y446 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PKP3Q9Y446 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.81■□□□□ 0.92
PKP3Q9Y446 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PKP3Q9Y446 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PKP3Q9Y446 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PKP3Q9Y446 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PKP3Q9Y446 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
PKP3Q9Y446 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PKP3Q9Y446 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PKP3Q9Y446 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PKP3Q9Y446 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms