Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF216Q9NWF9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF216Q9NWF9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF216Q9NWF9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF216Q9NWF9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
RNF216Q9NWF9 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC23.55■■□□□ 1.36
RNF216Q9NWF9 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC23.55■■□□□ 1.36
RNF216Q9NWF9 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF216Q9NWF9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF216Q9NWF9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF216Q9NWF9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF216Q9NWF9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF216Q9NWF9 AC008507.2-201ENST00000588402 1176 ntBASIC23.55■■□□□ 1.36
RNF216Q9NWF9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF216Q9NWF9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF216Q9NWF9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF216Q9NWF9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
RNF216Q9NWF9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.54■■□□□ 1.36
RNF216Q9NWF9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF216Q9NWF9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.54■■□□□ 1.36
RNF216Q9NWF9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.54■■□□□ 1.36
RNF216Q9NWF9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC23.54■■□□□ 1.36
RNF216Q9NWF9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF216Q9NWF9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF216Q9NWF9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RNF216Q9NWF9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.54■■□□□ 1.36
RNF216Q9NWF9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
RNF216Q9NWF9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 ZNF736P1Y-201ENST00000440402 1276 ntBASIC23.52■■□□□ 1.36
RNF216Q9NWF9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 AC025165.5-201ENST00000602802 578 ntBASIC23.52■■□□□ 1.36
RNF216Q9NWF9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF216Q9NWF9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.35
RNF216Q9NWF9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 FBXW4P1-201ENST00000426721 2239 ntBASIC23.51■■□□□ 1.35
RNF216Q9NWF9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 METTL15-211ENST00000634762 718 ntTSL 5 BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
RNF216Q9NWF9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
RNF216Q9NWF9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RNF216Q9NWF9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.5■■□□□ 1.35
RNF216Q9NWF9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
RNF216Q9NWF9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.5■■□□□ 1.35
RNF216Q9NWF9 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC23.5■■□□□ 1.35
RNF216Q9NWF9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RNF216Q9NWF9 SEPHS1P7-201ENST00000452995 1177 ntBASIC23.5■■□□□ 1.35
RNF216Q9NWF9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.5■■□□□ 1.35
RNF216Q9NWF9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.5■■□□□ 1.35
RNF216Q9NWF9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.5■■□□□ 1.35
RNF216Q9NWF9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RNF216Q9NWF9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF216Q9NWF9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RNF216Q9NWF9 AC135178.5-201ENST00000602597 674 ntBASIC23.5■■□□□ 1.35
RNF216Q9NWF9 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC23.5■■□□□ 1.35
RNF216Q9NWF9 AC139530.1-201ENST00000575312 1977 ntBASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms