Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.15■■□□□ 1.14
TLR9Q9NR96 KRT18P68-201ENST00000392293 1000 ntBASIC22.15■■□□□ 1.14
TLR9Q9NR96 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.15■■□□□ 1.14
TLR9Q9NR96 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TLR9Q9NR96 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TLR9Q9NR96 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.15■■□□□ 1.14
TLR9Q9NR96 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TLR9Q9NR96 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.15■■□□□ 1.14
TLR9Q9NR96 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
TLR9Q9NR96 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.14
TLR9Q9NR96 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
TLR9Q9NR96 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
TLR9Q9NR96 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.14■■□□□ 1.14
TLR9Q9NR96 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TLR9Q9NR96 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TLR9Q9NR96 MIR1224-201ENST00000408193 85 ntBASIC22.14■■□□□ 1.13
TLR9Q9NR96 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
TLR9Q9NR96 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.14■■□□□ 1.13
TLR9Q9NR96 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
TLR9Q9NR96 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.14■■□□□ 1.13
TLR9Q9NR96 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
TLR9Q9NR96 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TLR9Q9NR96 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.14■■□□□ 1.13
TLR9Q9NR96 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TLR9Q9NR96 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TLR9Q9NR96 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.13■■□□□ 1.13
TLR9Q9NR96 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
TLR9Q9NR96 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.13■■□□□ 1.13
TLR9Q9NR96 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TLR9Q9NR96 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TLR9Q9NR96 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.13■■□□□ 1.13
TLR9Q9NR96 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.13■■□□□ 1.13
TLR9Q9NR96 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.13■■□□□ 1.13
TLR9Q9NR96 RN7SL471P-201ENST00000580476 299 ntBASIC22.13■■□□□ 1.13
TLR9Q9NR96 MIR4497-201ENST00000583208 89 ntBASIC22.13■■□□□ 1.13
TLR9Q9NR96 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.13■■□□□ 1.13
TLR9Q9NR96 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TLR9Q9NR96 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TLR9Q9NR96 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TLR9Q9NR96 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TLR9Q9NR96 C11orf96-202ENST00000528572 1834 ntBASIC22.13■■□□□ 1.13
TLR9Q9NR96 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.12■■□□□ 1.13
TLR9Q9NR96 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
TLR9Q9NR96 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TLR9Q9NR96 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TLR9Q9NR96 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TLR9Q9NR96 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.12■■□□□ 1.13
TLR9Q9NR96 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TLR9Q9NR96 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
TLR9Q9NR96 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.12■■□□□ 1.13
TLR9Q9NR96 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.12■■□□□ 1.13
TLR9Q9NR96 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.12■■□□□ 1.13
TLR9Q9NR96 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TLR9Q9NR96 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.12■■□□□ 1.13
TLR9Q9NR96 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TLR9Q9NR96 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TLR9Q9NR96 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
TLR9Q9NR96 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TLR9Q9NR96 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TLR9Q9NR96 AC007322.3-201ENST00000426526 701 ntBASIC22.11■■□□□ 1.13
TLR9Q9NR96 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TLR9Q9NR96 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.11■■□□□ 1.13
TLR9Q9NR96 SOX15-203ENST00000570788 1093 ntBASIC22.11■■□□□ 1.13
TLR9Q9NR96 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.11■■□□□ 1.13
TLR9Q9NR96 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.11■■□□□ 1.13
TLR9Q9NR96 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
TLR9Q9NR96 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TLR9Q9NR96 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.11■■□□□ 1.13
TLR9Q9NR96 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.1■■□□□ 1.13
TLR9Q9NR96 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TLR9Q9NR96 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TLR9Q9NR96 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TLR9Q9NR96 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
TLR9Q9NR96 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.1■■□□□ 1.13
TLR9Q9NR96 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.1■■□□□ 1.13
TLR9Q9NR96 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.1■■□□□ 1.13
TLR9Q9NR96 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.1■■□□□ 1.13
TLR9Q9NR96 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.1■■□□□ 1.13
TLR9Q9NR96 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.1■■□□□ 1.13
TLR9Q9NR96 AC069544.1-201ENST00000609399 999 ntBASIC22.1■■□□□ 1.13
TLR9Q9NR96 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TLR9Q9NR96 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TLR9Q9NR96 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TLR9Q9NR96 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.1■■□□□ 1.13
TLR9Q9NR96 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TLR9Q9NR96 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TLR9Q9NR96 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TLR9Q9NR96 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TLR9Q9NR96 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TLR9Q9NR96 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TLR9Q9NR96 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.09■■□□□ 1.13
TLR9Q9NR96 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.09■■□□□ 1.13
TLR9Q9NR96 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.09■■□□□ 1.13
TLR9Q9NR96 AC233263.1-201ENST00000578059 224 ntBASIC22.09■■□□□ 1.13
TLR9Q9NR96 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.09■■□□□ 1.13
TLR9Q9NR96 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
TLR9Q9NR96 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TLR9Q9NR96 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
TLR9Q9NR96 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.08■■□□□ 1.13
TLR9Q9NR96 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms