Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
HPS4Q9NQG7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 AC127496.7-201ENST00000625110 1798 ntBASIC21.51■■□□□ 1.03
HPS4Q9NQG7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 AC098590.1-201ENST00000468126 897 ntBASIC21.51■■□□□ 1.03
HPS4Q9NQG7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HPS4Q9NQG7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.5■■□□□ 1.03
HPS4Q9NQG7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HPS4Q9NQG7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.5■■□□□ 1.03
HPS4Q9NQG7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.5■■□□□ 1.03
HPS4Q9NQG7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
HPS4Q9NQG7 AL355472.2-201ENST00000422958 438 ntBASIC21.5■■□□□ 1.03
HPS4Q9NQG7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.5■■□□□ 1.03
HPS4Q9NQG7 RPS2P52-201ENST00000469610 820 ntBASIC21.5■■□□□ 1.03
HPS4Q9NQG7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.5■■□□□ 1.03
HPS4Q9NQG7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
HPS4Q9NQG7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.5■■□□□ 1.03
HPS4Q9NQG7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.5■■□□□ 1.03
HPS4Q9NQG7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.5■■□□□ 1.03
HPS4Q9NQG7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.5■■□□□ 1.03
HPS4Q9NQG7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.5■■□□□ 1.03
HPS4Q9NQG7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
HPS4Q9NQG7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HPS4Q9NQG7 KRT17P1-201ENST00000399211 1546 ntBASIC21.5■■□□□ 1.03
HPS4Q9NQG7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HPS4Q9NQG7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.49■■□□□ 1.03
HPS4Q9NQG7 AC010542.4-201ENST00000563151 1910 ntBASIC21.49■■□□□ 1.03
HPS4Q9NQG7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.49■■□□□ 1.03
HPS4Q9NQG7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.49■■□□□ 1.03
HPS4Q9NQG7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
HPS4Q9NQG7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.49■■□□□ 1.03
HPS4Q9NQG7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.49■■□□□ 1.03
HPS4Q9NQG7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.49■■□□□ 1.03
HPS4Q9NQG7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HPS4Q9NQG7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
HPS4Q9NQG7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HPS4Q9NQG7 C11orf96-202ENST00000528572 1834 ntBASIC21.48■■□□□ 1.03
HPS4Q9NQG7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
HPS4Q9NQG7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HPS4Q9NQG7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HPS4Q9NQG7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
HPS4Q9NQG7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
HPS4Q9NQG7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HPS4Q9NQG7 LSM12P1-201ENST00000411836 588 ntBASIC21.48■■□□□ 1.03
HPS4Q9NQG7 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.48■■□□□ 1.03
HPS4Q9NQG7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.48■■□□□ 1.03
HPS4Q9NQG7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.48■■□□□ 1.03
HPS4Q9NQG7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.48■■□□□ 1.03
HPS4Q9NQG7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HPS4Q9NQG7 FAM21FP-204ENST00000608637 956 ntBASIC21.48■■□□□ 1.03
HPS4Q9NQG7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HPS4Q9NQG7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HPS4Q9NQG7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.48■■□□□ 1.03
HPS4Q9NQG7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
HPS4Q9NQG7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
HPS4Q9NQG7 AC233723.2-201ENST00000623798 2106 ntBASIC21.47■■□□□ 1.03
HPS4Q9NQG7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HPS4Q9NQG7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.47■■□□□ 1.03
HPS4Q9NQG7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.47■■□□□ 1.03
HPS4Q9NQG7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.47■■□□□ 1.03
HPS4Q9NQG7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.47■■□□□ 1.03
HPS4Q9NQG7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HPS4Q9NQG7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.47■■□□□ 1.03
HPS4Q9NQG7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
HPS4Q9NQG7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.47■■□□□ 1.03
HPS4Q9NQG7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.47■■□□□ 1.03
HPS4Q9NQG7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
HPS4Q9NQG7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
HPS4Q9NQG7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HPS4Q9NQG7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
HPS4Q9NQG7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HPS4Q9NQG7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HPS4Q9NQG7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HPS4Q9NQG7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
HPS4Q9NQG7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HPS4Q9NQG7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HPS4Q9NQG7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HPS4Q9NQG7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HPS4Q9NQG7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.46■■□□□ 1.03
HPS4Q9NQG7 AC245052.3-201ENST00000450182 901 ntBASIC21.46■■□□□ 1.03
HPS4Q9NQG7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.46■■□□□ 1.03
HPS4Q9NQG7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HPS4Q9NQG7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.46■■□□□ 1.03
HPS4Q9NQG7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms