Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HINT3Q9NQE9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.75■□□□□ 0.59
HINT3Q9NQE9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HINT3Q9NQE9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HINT3Q9NQE9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HINT3Q9NQE9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HINT3Q9NQE9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.75■□□□□ 0.59
HINT3Q9NQE9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HINT3Q9NQE9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HINT3Q9NQE9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HINT3Q9NQE9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.75■□□□□ 0.59
HINT3Q9NQE9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HINT3Q9NQE9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.75■□□□□ 0.59
HINT3Q9NQE9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.75■□□□□ 0.59
HINT3Q9NQE9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.75■□□□□ 0.59
HINT3Q9NQE9 AC027702.1-201ENST00000563810 1770 ntBASIC18.75■□□□□ 0.59
HINT3Q9NQE9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.75■□□□□ 0.59
HINT3Q9NQE9 TSPY26P-201ENST00000476365 1326 ntBASIC18.74■□□□□ 0.59
HINT3Q9NQE9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 AL391422.3-201ENST00000603791 2761 ntBASIC18.74■□□□□ 0.59
HINT3Q9NQE9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 IGHV3-19-201ENST00000521488 291 ntBASIC18.74■□□□□ 0.59
HINT3Q9NQE9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 AL121603.2-201ENST00000557373 2117 ntBASIC18.74■□□□□ 0.59
HINT3Q9NQE9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HINT3Q9NQE9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HINT3Q9NQE9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.73■□□□□ 0.59
HINT3Q9NQE9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HINT3Q9NQE9 AC055733.4-201ENST00000638462 1354 ntBASIC18.73■□□□□ 0.59
HINT3Q9NQE9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HINT3Q9NQE9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HINT3Q9NQE9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HINT3Q9NQE9 MIR935-201ENST00000401179 91 ntBASIC18.73■□□□□ 0.59
HINT3Q9NQE9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HINT3Q9NQE9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.73■□□□□ 0.59
HINT3Q9NQE9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HINT3Q9NQE9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.73■□□□□ 0.59
HINT3Q9NQE9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
HINT3Q9NQE9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HINT3Q9NQE9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
HINT3Q9NQE9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.73■□□□□ 0.59
HINT3Q9NQE9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
HINT3Q9NQE9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 IRS3P-201ENST00000223076 1006 ntBASIC18.72■□□□□ 0.59
HINT3Q9NQE9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 AC009237.3-201ENST00000393279 1427 ntBASIC18.72■□□□□ 0.59
HINT3Q9NQE9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HINT3Q9NQE9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HINT3Q9NQE9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HINT3Q9NQE9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HINT3Q9NQE9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HINT3Q9NQE9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HINT3Q9NQE9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.71■□□□□ 0.59
HINT3Q9NQE9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.71■□□□□ 0.59
HINT3Q9NQE9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HINT3Q9NQE9 AC007225.1-201ENST00000566331 1836 ntBASIC18.71■□□□□ 0.59
HINT3Q9NQE9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
HINT3Q9NQE9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HINT3Q9NQE9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HINT3Q9NQE9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.71■□□□□ 0.59
HINT3Q9NQE9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HINT3Q9NQE9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HINT3Q9NQE9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HINT3Q9NQE9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms