Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GCM1Q9NP62 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GCM1Q9NP62 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GCM1Q9NP62 SLC7A5P1-201ENST00000568957 537 ntBASIC17.74■□□□□ 0.43
GCM1Q9NP62 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GCM1Q9NP62 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GCM1Q9NP62 MYCNOS-205ENST00000641950 531 ntBASIC17.74■□□□□ 0.43
GCM1Q9NP62 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GCM1Q9NP62 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
GCM1Q9NP62 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.74■□□□□ 0.43
GCM1Q9NP62 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
GCM1Q9NP62 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GCM1Q9NP62 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GCM1Q9NP62 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCM1Q9NP62 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCM1Q9NP62 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCM1Q9NP62 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.73■□□□□ 0.43
GCM1Q9NP62 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GCM1Q9NP62 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCM1Q9NP62 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GCM1Q9NP62 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCM1Q9NP62 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCM1Q9NP62 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
GCM1Q9NP62 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCM1Q9NP62 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCM1Q9NP62 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.73■□□□□ 0.43
GCM1Q9NP62 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.73■□□□□ 0.43
GCM1Q9NP62 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.73■□□□□ 0.43
GCM1Q9NP62 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
GCM1Q9NP62 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.73■□□□□ 0.43
GCM1Q9NP62 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.73■□□□□ 0.43
GCM1Q9NP62 BID-214ENST00000617586 542 ntTSL 5 BASIC17.73■□□□□ 0.43
GCM1Q9NP62 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCM1Q9NP62 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCM1Q9NP62 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCM1Q9NP62 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GCM1Q9NP62 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
GCM1Q9NP62 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
GCM1Q9NP62 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
GCM1Q9NP62 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
GCM1Q9NP62 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.72■□□□□ 0.43
GCM1Q9NP62 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.72■□□□□ 0.43
GCM1Q9NP62 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GCM1Q9NP62 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.72■□□□□ 0.43
GCM1Q9NP62 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
GCM1Q9NP62 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.71■□□□□ 0.43
GCM1Q9NP62 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.71■□□□□ 0.43
GCM1Q9NP62 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GCM1Q9NP62 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
GCM1Q9NP62 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GCM1Q9NP62 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GCM1Q9NP62 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.71■□□□□ 0.43
GCM1Q9NP62 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GCM1Q9NP62 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.71■□□□□ 0.43
GCM1Q9NP62 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.71■□□□□ 0.43
GCM1Q9NP62 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.71■□□□□ 0.43
GCM1Q9NP62 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.71■□□□□ 0.43
GCM1Q9NP62 AC011767.1-201ENST00000617410 1153 ntBASIC17.71■□□□□ 0.43
GCM1Q9NP62 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.71■□□□□ 0.43
GCM1Q9NP62 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
GCM1Q9NP62 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.71■□□□□ 0.43
GCM1Q9NP62 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GCM1Q9NP62 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
GCM1Q9NP62 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.71■□□□□ 0.43
GCM1Q9NP62 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
GCM1Q9NP62 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
GCM1Q9NP62 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GCM1Q9NP62 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.71■□□□□ 0.43
GCM1Q9NP62 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
GCM1Q9NP62 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
GCM1Q9NP62 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
GCM1Q9NP62 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCM1Q9NP62 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCM1Q9NP62 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.7■□□□□ 0.42
GCM1Q9NP62 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GCM1Q9NP62 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.7■□□□□ 0.42
GCM1Q9NP62 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GCM1Q9NP62 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCM1Q9NP62 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCM1Q9NP62 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GCM1Q9NP62 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
GCM1Q9NP62 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCM1Q9NP62 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.7■□□□□ 0.42
GCM1Q9NP62 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms