Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RC3H2Q9HBD1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.34■■□□□ 1.17
RC3H2Q9HBD1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.34■■□□□ 1.17
RC3H2Q9HBD1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
RC3H2Q9HBD1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.34■■□□□ 1.17
RC3H2Q9HBD1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
RC3H2Q9HBD1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RC3H2Q9HBD1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RC3H2Q9HBD1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RC3H2Q9HBD1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 AC127496.7-201ENST00000625110 1798 ntBASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 AC105020.6-201ENST00000621523 1217 ntBASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.33■■□□□ 1.17
RC3H2Q9HBD1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.33■■□□□ 1.16
RC3H2Q9HBD1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RC3H2Q9HBD1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
RC3H2Q9HBD1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.33■■□□□ 1.16
RC3H2Q9HBD1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RC3H2Q9HBD1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RC3H2Q9HBD1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RC3H2Q9HBD1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RC3H2Q9HBD1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RC3H2Q9HBD1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RC3H2Q9HBD1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RC3H2Q9HBD1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RC3H2Q9HBD1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
RC3H2Q9HBD1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RC3H2Q9HBD1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RC3H2Q9HBD1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RC3H2Q9HBD1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.31■■□□□ 1.16
RC3H2Q9HBD1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H2Q9HBD1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H2Q9HBD1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.3■■□□□ 1.16
RC3H2Q9HBD1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H2Q9HBD1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H2Q9HBD1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H2Q9HBD1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.3■■□□□ 1.16
RC3H2Q9HBD1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H2Q9HBD1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H2Q9HBD1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
RC3H2Q9HBD1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.3■■□□□ 1.16
RC3H2Q9HBD1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.3■■□□□ 1.16
RC3H2Q9HBD1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.3■■□□□ 1.16
RC3H2Q9HBD1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H2Q9HBD1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H2Q9HBD1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H2Q9HBD1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H2Q9HBD1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H2Q9HBD1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H2Q9HBD1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H2Q9HBD1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RC3H2Q9HBD1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H2Q9HBD1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H2Q9HBD1 POM121L13P-201ENST00000422362 380 ntBASIC22.29■■□□□ 1.16
RC3H2Q9HBD1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.29■■□□□ 1.16
RC3H2Q9HBD1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.29■■□□□ 1.16
RC3H2Q9HBD1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.29■■□□□ 1.16
RC3H2Q9HBD1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.29■■□□□ 1.16
RC3H2Q9HBD1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RC3H2Q9HBD1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
RC3H2Q9HBD1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H2Q9HBD1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H2Q9HBD1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H2Q9HBD1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RC3H2Q9HBD1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H2Q9HBD1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H2Q9HBD1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H2Q9HBD1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H2Q9HBD1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H2Q9HBD1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms