Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 AC097381.1-201ENST00000429019 1296 ntBASIC26.19■■□□□ 1.78
CHMP4BQ9H444 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHMP4BQ9H444 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHMP4BQ9H444 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHMP4BQ9H444 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHMP4BQ9H444 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHMP4BQ9H444 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHMP4BQ9H444 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
CHMP4BQ9H444 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC26.18■■□□□ 1.78
CHMP4BQ9H444 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHMP4BQ9H444 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CHMP4BQ9H444 AC034268.1-201ENST00000441047 882 ntBASIC26.18■■□□□ 1.78
CHMP4BQ9H444 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC26.18■■□□□ 1.78
CHMP4BQ9H444 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHMP4BQ9H444 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.18■■□□□ 1.78
CHMP4BQ9H444 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC26.18■■□□□ 1.78
CHMP4BQ9H444 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC26.18■■□□□ 1.78
CHMP4BQ9H444 RARRES2P11-201ENST00000635158 484 ntBASIC26.18■■□□□ 1.78
CHMP4BQ9H444 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.18■■□□□ 1.78
CHMP4BQ9H444 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHMP4BQ9H444 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHMP4BQ9H444 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CHMP4BQ9H444 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHMP4BQ9H444 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 PLK5-205ENST00000642079 1969 ntBASIC26.17■■□□□ 1.78
CHMP4BQ9H444 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 MIR6821-201ENST00000617625 74 ntBASIC26.17■■□□□ 1.78
CHMP4BQ9H444 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHMP4BQ9H444 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CHMP4BQ9H444 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CHMP4BQ9H444 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CHMP4BQ9H444 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CHMP4BQ9H444 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CHMP4BQ9H444 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.16■■□□□ 1.78
CHMP4BQ9H444 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.16■■□□□ 1.78
CHMP4BQ9H444 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.16■■□□□ 1.78
CHMP4BQ9H444 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
CHMP4BQ9H444 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CHMP4BQ9H444 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CHMP4BQ9H444 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
CHMP4BQ9H444 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
CHMP4BQ9H444 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHMP4BQ9H444 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHMP4BQ9H444 SLC7A5P2-201ENST00000553010 536 ntBASIC26.15■■□□□ 1.78
CHMP4BQ9H444 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.15■■□□□ 1.78
CHMP4BQ9H444 AC243732.1-201ENST00000612648 864 ntBASIC26.15■■□□□ 1.78
CHMP4BQ9H444 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHMP4BQ9H444 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHMP4BQ9H444 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHMP4BQ9H444 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHMP4BQ9H444 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHMP4BQ9H444 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CHMP4BQ9H444 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC26.14■■□□□ 1.78
CHMP4BQ9H444 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
CHMP4BQ9H444 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CHMP4BQ9H444 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CHMP4BQ9H444 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC26.14■■□□□ 1.78
CHMP4BQ9H444 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CHMP4BQ9H444 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.78
CHMP4BQ9H444 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CHMP4BQ9H444 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CHMP4BQ9H444 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CHMP4BQ9H444 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CHMP4BQ9H444 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC26.14■■□□□ 1.77
CHMP4BQ9H444 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
CHMP4BQ9H444 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
CHMP4BQ9H444 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHMP4BQ9H444 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHMP4BQ9H444 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.13■■□□□ 1.77
CHMP4BQ9H444 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CHMP4BQ9H444 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC26.13■■□□□ 1.77
CHMP4BQ9H444 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHMP4BQ9H444 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC26.13■■□□□ 1.77
CHMP4BQ9H444 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHMP4BQ9H444 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.13■■□□□ 1.77
CHMP4BQ9H444 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.13■■□□□ 1.77
CHMP4BQ9H444 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CHMP4BQ9H444 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHMP4BQ9H444 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CHMP4BQ9H444 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHMP4BQ9H444 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
CHMP4BQ9H444 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC26.13■■□□□ 1.77
CHMP4BQ9H444 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHMP4BQ9H444 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
CHMP4BQ9H444 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CHMP4BQ9H444 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms