Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC10.54□□□□□ -0.72
KRTAP3-1Q9BYR8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 AC055733.4-201ENST00000638462 1354 ntBASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 AC011298.3-201ENST00000615796 283 ntBASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-1Q9BYR8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
KRTAP3-1Q9BYR8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
KRTAP3-1Q9BYR8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC10.52□□□□□ -0.72
KRTAP3-1Q9BYR8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC10.52□□□□□ -0.72
KRTAP3-1Q9BYR8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
KRTAP3-1Q9BYR8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 AC087289.5-201ENST00000586076 3175 ntBASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 MIR4466-201ENST00000606121 54 ntBASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
KRTAP3-1Q9BYR8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-1Q9BYR8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms