Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00479Q96M42 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LINC00479Q96M42 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00479Q96M42 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00479Q96M42 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00479Q96M42 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00479Q96M42 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LINC00479Q96M42 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00479Q96M42 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00479Q96M42 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00479Q96M42 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LINC00479Q96M42 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00479Q96M42 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC00479Q96M42 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.85■□□□□ 0.13
LINC00479Q96M42 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LINC00479Q96M42 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00479Q96M42 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00479Q96M42 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00479Q96M42 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LINC00479Q96M42 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00479Q96M42 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00479Q96M42 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00479Q96M42 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00479Q96M42 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00479Q96M42 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LINC00479Q96M42 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00479Q96M42 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00479Q96M42 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.84■□□□□ 0.13
LINC00479Q96M42 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00479Q96M42 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC00479Q96M42 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LINC00479Q96M42 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00479Q96M42 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LINC00479Q96M42 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00479Q96M42 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC00479Q96M42 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00479Q96M42 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
LINC00479Q96M42 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00479Q96M42 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.84■□□□□ 0.13
LINC00479Q96M42 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00479Q96M42 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00479Q96M42 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00479Q96M42 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00479Q96M42 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
LINC00479Q96M42 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00479Q96M42 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
LINC00479Q96M42 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LINC00479Q96M42 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
LINC00479Q96M42 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LINC00479Q96M42 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00479Q96M42 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00479Q96M42 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.83■□□□□ 0.12
LINC00479Q96M42 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00479Q96M42 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.83■□□□□ 0.12
LINC00479Q96M42 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.83■□□□□ 0.12
LINC00479Q96M42 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00479Q96M42 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC15.83■□□□□ 0.12
LINC00479Q96M42 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00479Q96M42 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00479Q96M42 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.83■□□□□ 0.12
LINC00479Q96M42 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00479Q96M42 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00479Q96M42 AP006587.3-201ENST00000525742 1516 ntBASIC15.83■□□□□ 0.12
LINC00479Q96M42 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.83■□□□□ 0.12
LINC00479Q96M42 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.83■□□□□ 0.12
LINC00479Q96M42 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.83■□□□□ 0.12
LINC00479Q96M42 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00479Q96M42 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LINC00479Q96M42 AL162377.1-201ENST00000618844 1793 ntBASIC15.82■□□□□ 0.12
LINC00479Q96M42 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00479Q96M42 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00479Q96M42 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00479Q96M42 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LINC00479Q96M42 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.82■□□□□ 0.12
LINC00479Q96M42 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00479Q96M42 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00479Q96M42 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LINC00479Q96M42 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.82■□□□□ 0.12
LINC00479Q96M42 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00479Q96M42 AL020996.1-203ENST00000536896 2307 ntBASIC15.82■□□□□ 0.12
LINC00479Q96M42 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00479Q96M42 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00479Q96M42 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00479Q96M42 MIR6724-1-201ENST00000616420 92 ntBASIC15.82■□□□□ 0.12
LINC00479Q96M42 MIR6724-2-201ENST00000616483 92 ntBASIC15.82■□□□□ 0.12
LINC00479Q96M42 MIR6724-4-201ENST00000617390 92 ntBASIC15.82■□□□□ 0.12
LINC00479Q96M42 MIR6724-3-201ENST00000622482 92 ntBASIC15.82■□□□□ 0.12
LINC00479Q96M42 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.82■□□□□ 0.12
LINC00479Q96M42 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LINC00479Q96M42 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00479Q96M42 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
LINC00479Q96M42 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00479Q96M42 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.82■□□□□ 0.12
LINC00479Q96M42 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00479Q96M42 FP700111.2-201ENST00000619190 1892 ntBASIC15.82■□□□□ 0.12
LINC00479Q96M42 AC099778.1-201ENST00000568593 1911 ntBASIC15.82■□□□□ 0.12
LINC00479Q96M42 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.82■□□□□ 0.12
LINC00479Q96M42 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00479Q96M42 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00479Q96M42 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms