Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
SIPA1Q96FS4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 AC007322.3-201ENST00000426526 701 ntBASIC20.88■□□□□ 0.93
SIPA1Q96FS4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 AC006058.3-201ENST00000606217 1069 ntBASIC20.88■□□□□ 0.93
SIPA1Q96FS4 AL589743.5-201ENST00000616611 1050 ntBASIC20.88■□□□□ 0.93
SIPA1Q96FS4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.88■□□□□ 0.93
SIPA1Q96FS4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIPA1Q96FS4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.87■□□□□ 0.93
SIPA1Q96FS4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.87■□□□□ 0.93
SIPA1Q96FS4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SIPA1Q96FS4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SIPA1Q96FS4 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.87■□□□□ 0.93
SIPA1Q96FS4 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.87■□□□□ 0.93
SIPA1Q96FS4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.87■□□□□ 0.93
SIPA1Q96FS4 UNC93B5-201ENST00000530315 699 ntBASIC20.87■□□□□ 0.93
SIPA1Q96FS4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.87■□□□□ 0.93
SIPA1Q96FS4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIPA1Q96FS4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIPA1Q96FS4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
SIPA1Q96FS4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIPA1Q96FS4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIPA1Q96FS4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIPA1Q96FS4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.86■□□□□ 0.93
SIPA1Q96FS4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 AC128676.1-201ENST00000454392 318 ntBASIC20.85■□□□□ 0.93
SIPA1Q96FS4 AC026366.1-201ENST00000488803 879 ntBASIC20.85■□□□□ 0.93
SIPA1Q96FS4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.85■□□□□ 0.93
SIPA1Q96FS4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIPA1Q96FS4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIPA1Q96FS4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIPA1Q96FS4 KRT18P68-201ENST00000392293 1000 ntBASIC20.84■□□□□ 0.93
SIPA1Q96FS4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.84■□□□□ 0.93
SIPA1Q96FS4 AC098590.1-201ENST00000468126 897 ntBASIC20.84■□□□□ 0.93
SIPA1Q96FS4 RPS2P52-201ENST00000469610 820 ntBASIC20.84■□□□□ 0.93
SIPA1Q96FS4 AP003097.1-201ENST00000530657 1135 ntBASIC20.84■□□□□ 0.93
SIPA1Q96FS4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIPA1Q96FS4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.84■□□□□ 0.93
SIPA1Q96FS4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.84■□□□□ 0.93
SIPA1Q96FS4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SIPA1Q96FS4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIPA1Q96FS4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIPA1Q96FS4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIPA1Q96FS4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIPA1Q96FS4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIPA1Q96FS4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.83■□□□□ 0.93
SIPA1Q96FS4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms