Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 MIR663A-201ENST00000385250 93 ntBASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3KBP1Q96B97 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH3KBP1Q96B97 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3KBP1Q96B97 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.53■□□□□ 0.88
SH3KBP1Q96B97 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3KBP1Q96B97 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SH3KBP1Q96B97 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3KBP1Q96B97 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.53■□□□□ 0.88
SH3KBP1Q96B97 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3KBP1Q96B97 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3KBP1Q96B97 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.53■□□□□ 0.88
SH3KBP1Q96B97 NCF1B-203ENST00000435988 1254 ntBASIC20.53■□□□□ 0.88
SH3KBP1Q96B97 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH3KBP1Q96B97 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3KBP1Q96B97 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SH3KBP1Q96B97 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SH3KBP1Q96B97 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3KBP1Q96B97 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.52■□□□□ 0.88
SH3KBP1Q96B97 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3KBP1Q96B97 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
SH3KBP1Q96B97 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SH3KBP1Q96B97 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.52■□□□□ 0.88
SH3KBP1Q96B97 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SH3KBP1Q96B97 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
SH3KBP1Q96B97 AC005181.1-201ENST00000604782 1256 ntBASIC20.52■□□□□ 0.88
SH3KBP1Q96B97 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.52■□□□□ 0.88
SH3KBP1Q96B97 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3KBP1Q96B97 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SH3KBP1Q96B97 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SH3KBP1Q96B97 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3KBP1Q96B97 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3KBP1Q96B97 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3KBP1Q96B97 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3KBP1Q96B97 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.87
SH3KBP1Q96B97 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SH3KBP1Q96B97 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SH3KBP1Q96B97 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SH3KBP1Q96B97 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 GPX1P1-201ENST00000388829 606 ntBASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 AL109923.1-201ENST00000618799 583 ntBASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 AC013268.1-206ENST00000638368 961 ntBASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 AC112229.1-201ENST00000639295 961 ntBASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.51■□□□□ 0.87
SH3KBP1Q96B97 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 AIRN-201ENST00000601203 4374 ntBASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 TERF1P5-201ENST00000477545 1207 ntBASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 SLC7A5P2-201ENST00000553010 536 ntBASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 AL121832.2-201ENST00000610979 668 ntBASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SH3KBP1Q96B97 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SH3KBP1Q96B97 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms