Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLNQ969V3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
NCLNQ969V3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLNQ969V3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NCLNQ969V3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLNQ969V3 KRT18P14-201ENST00000534205 1250 ntBASIC20.06■□□□□ 0.8
NCLNQ969V3 DUX4L2-201ENST00000561772 1275 ntBASIC20.06■□□□□ 0.8
NCLNQ969V3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.06■□□□□ 0.8
NCLNQ969V3 TERF1P2-201ENST00000583350 1212 ntBASIC20.06■□□□□ 0.8
NCLNQ969V3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
NCLNQ969V3 DUX4L6-201ENST00000626483 1275 ntBASIC20.06■□□□□ 0.8
NCLNQ969V3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NCLNQ969V3 DUX4L1-201ENST00000627662 1275 ntBASIC20.06■□□□□ 0.8
NCLNQ969V3 DUX4L8-201ENST00000629013 1275 ntBASIC20.06■□□□□ 0.8
NCLNQ969V3 DUX4L3-201ENST00000630187 1275 ntBASIC20.06■□□□□ 0.8
NCLNQ969V3 DUX4L7-201ENST00000630678 1275 ntBASIC20.06■□□□□ 0.8
NCLNQ969V3 DUX4L5-201ENST00000630834 1275 ntBASIC20.06■□□□□ 0.8
NCLNQ969V3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NCLNQ969V3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.06■□□□□ 0.8
NCLNQ969V3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLNQ969V3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
NCLNQ969V3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.05■□□□□ 0.8
NCLNQ969V3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.05■□□□□ 0.8
NCLNQ969V3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.05■□□□□ 0.8
NCLNQ969V3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.05■□□□□ 0.8
NCLNQ969V3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLNQ969V3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLNQ969V3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NCLNQ969V3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCLNQ969V3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.05■□□□□ 0.8
NCLNQ969V3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCLNQ969V3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCLNQ969V3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLNQ969V3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.05■□□□□ 0.8
NCLNQ969V3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLNQ969V3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLNQ969V3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLNQ969V3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCLNQ969V3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.05■□□□□ 0.8
NCLNQ969V3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NCLNQ969V3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCLNQ969V3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NCLNQ969V3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLNQ969V3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCLNQ969V3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCLNQ969V3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCLNQ969V3 AP004607.7-201ENST00000527152 1677 ntBASIC20.04■□□□□ 0.8
NCLNQ969V3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCLNQ969V3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCLNQ969V3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCLNQ969V3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCLNQ969V3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.04■□□□□ 0.8
NCLNQ969V3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCLNQ969V3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.04■□□□□ 0.8
NCLNQ969V3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.04■□□□□ 0.8
NCLNQ969V3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NCLNQ969V3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCLNQ969V3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCLNQ969V3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCLNQ969V3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCLNQ969V3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.04■□□□□ 0.8
NCLNQ969V3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLNQ969V3 AL121603.2-201ENST00000557373 2117 ntBASIC20.03■□□□□ 0.8
NCLNQ969V3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NCLNQ969V3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLNQ969V3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLNQ969V3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
NCLNQ969V3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLNQ969V3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.03■□□□□ 0.8
NCLNQ969V3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.03■□□□□ 0.8
NCLNQ969V3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NCLNQ969V3 AL162430.1-201ENST00000480705 870 ntBASIC20.03■□□□□ 0.8
NCLNQ969V3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLNQ969V3 LINC01521-201ENST00000504184 1943 ntBASIC20.03■□□□□ 0.8
NCLNQ969V3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLNQ969V3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLNQ969V3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLNQ969V3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.03■□□□□ 0.8
NCLNQ969V3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLNQ969V3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLNQ969V3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLNQ969V3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLNQ969V3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.03■□□□□ 0.8
NCLNQ969V3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCLNQ969V3 AC009237.3-201ENST00000393279 1427 ntBASIC20.02■□□□□ 0.8
NCLNQ969V3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCLNQ969V3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCLNQ969V3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NCLNQ969V3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCLNQ969V3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NCLNQ969V3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
NCLNQ969V3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.02■□□□□ 0.8
NCLNQ969V3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
NCLNQ969V3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NCLNQ969V3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.02■□□□□ 0.8
NCLNQ969V3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NCLNQ969V3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NCLNQ969V3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.02■□□□□ 0.8
NCLNQ969V3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
NCLNQ969V3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms