Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD5Q8TDI0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD5Q8TDI0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD5Q8TDI0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.15■□□□□ 0.98
CHD5Q8TDI0 AC087633.2-202ENST00000565166 1439 ntBASIC21.15■□□□□ 0.98
CHD5Q8TDI0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHD5Q8TDI0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHD5Q8TDI0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CHD5Q8TDI0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.15■□□□□ 0.98
CHD5Q8TDI0 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.15■□□□□ 0.98
CHD5Q8TDI0 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.15■□□□□ 0.98
CHD5Q8TDI0 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.15■□□□□ 0.98
CHD5Q8TDI0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.15■□□□□ 0.98
CHD5Q8TDI0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD5Q8TDI0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHD5Q8TDI0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CHD5Q8TDI0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.14■□□□□ 0.98
CHD5Q8TDI0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.14■□□□□ 0.98
CHD5Q8TDI0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
CHD5Q8TDI0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHD5Q8TDI0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHD5Q8TDI0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CHD5Q8TDI0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD5Q8TDI0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD5Q8TDI0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD5Q8TDI0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.14■□□□□ 0.97
CHD5Q8TDI0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.14■□□□□ 0.97
CHD5Q8TDI0 ID1-201ENST00000376105 1233 ntBASIC21.14■□□□□ 0.97
CHD5Q8TDI0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.14■□□□□ 0.97
CHD5Q8TDI0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.14■□□□□ 0.97
CHD5Q8TDI0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD5Q8TDI0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD5Q8TDI0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD5Q8TDI0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD5Q8TDI0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.13■□□□□ 0.97
CHD5Q8TDI0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.12■□□□□ 0.97
CHD5Q8TDI0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD5Q8TDI0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHD5Q8TDI0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD5Q8TDI0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.12■□□□□ 0.97
CHD5Q8TDI0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CHD5Q8TDI0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD5Q8TDI0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.12■□□□□ 0.97
CHD5Q8TDI0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.12■□□□□ 0.97
CHD5Q8TDI0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.12■□□□□ 0.97
CHD5Q8TDI0 AC005181.1-201ENST00000604782 1256 ntBASIC21.12■□□□□ 0.97
CHD5Q8TDI0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD5Q8TDI0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 AL049796.1-201ENST00000565336 1766 ntBASIC21.11■□□□□ 0.97
CHD5Q8TDI0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD5Q8TDI0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.1■□□□□ 0.97
CHD5Q8TDI0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 AC098934.4-201ENST00000564127 592 ntBASIC21.1■□□□□ 0.97
CHD5Q8TDI0 AC104771.1-201ENST00000603335 964 ntBASIC21.1■□□□□ 0.97
CHD5Q8TDI0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 OR10C1-204ENST00000622521 1039 ntBASIC21.1■□□□□ 0.97
CHD5Q8TDI0 AC007375.3-201ENST00000600936 2314 ntBASIC21.1■□□□□ 0.97
CHD5Q8TDI0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 AL512625.2-201ENST00000417533 625 ntBASIC21.1■□□□□ 0.97
CHD5Q8TDI0 AC006970.2-201ENST00000450065 779 ntBASIC21.1■□□□□ 0.97
CHD5Q8TDI0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.1■□□□□ 0.97
CHD5Q8TDI0 AL591742.1-201ENST00000604433 565 ntBASIC21.1■□□□□ 0.97
CHD5Q8TDI0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms