Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPEB3Q8NE35 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CPEB3Q8NE35 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPEB3Q8NE35 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CPEB3Q8NE35 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.17■□□□□ 0.5
CPEB3Q8NE35 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.17■□□□□ 0.5
CPEB3Q8NE35 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.17■□□□□ 0.5
CPEB3Q8NE35 UBE2DNL-204ENST00000602536 740 ntBASIC18.17■□□□□ 0.5
CPEB3Q8NE35 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.17■□□□□ 0.5
CPEB3Q8NE35 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CPEB3Q8NE35 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPEB3Q8NE35 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPEB3Q8NE35 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPEB3Q8NE35 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPEB3Q8NE35 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPEB3Q8NE35 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPEB3Q8NE35 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CPEB3Q8NE35 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPEB3Q8NE35 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPEB3Q8NE35 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPEB3Q8NE35 AC137761.2-201ENST00000561729 223 ntBASIC18.16■□□□□ 0.5
CPEB3Q8NE35 AC145350.3-201ENST00000569033 163 ntBASIC18.16■□□□□ 0.5
CPEB3Q8NE35 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.16■□□□□ 0.5
CPEB3Q8NE35 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPEB3Q8NE35 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPEB3Q8NE35 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.16■□□□□ 0.5
CPEB3Q8NE35 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.16■□□□□ 0.5
CPEB3Q8NE35 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CPEB3Q8NE35 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPEB3Q8NE35 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPEB3Q8NE35 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPEB3Q8NE35 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPEB3Q8NE35 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPEB3Q8NE35 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.15■□□□□ 0.5
CPEB3Q8NE35 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.15■□□□□ 0.5
CPEB3Q8NE35 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPEB3Q8NE35 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.15■□□□□ 0.5
CPEB3Q8NE35 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.15■□□□□ 0.5
CPEB3Q8NE35 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPEB3Q8NE35 AC022517.1-201ENST00000592429 346 ntBASIC18.15■□□□□ 0.5
CPEB3Q8NE35 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.15■□□□□ 0.5
CPEB3Q8NE35 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPEB3Q8NE35 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPEB3Q8NE35 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CPEB3Q8NE35 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPEB3Q8NE35 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPEB3Q8NE35 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPEB3Q8NE35 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.15■□□□□ 0.5
CPEB3Q8NE35 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CPEB3Q8NE35 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 SLC7A5P1-201ENST00000568957 537 ntBASIC18.14■□□□□ 0.49
CPEB3Q8NE35 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPEB3Q8NE35 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 RARRES2P11-201ENST00000635158 484 ntBASIC18.13■□□□□ 0.49
CPEB3Q8NE35 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPEB3Q8NE35 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms