Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.08■□□□□ 0.81
LINC01555Q8NAE3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LINC01555Q8NAE3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01555Q8NAE3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01555Q8NAE3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01555Q8NAE3 MIR663A-201ENST00000385250 93 ntBASIC20.07■□□□□ 0.8
LINC01555Q8NAE3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01555Q8NAE3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.07■□□□□ 0.8
LINC01555Q8NAE3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01555Q8NAE3 AC005181.1-201ENST00000604782 1256 ntBASIC20.07■□□□□ 0.8
LINC01555Q8NAE3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.07■□□□□ 0.8
LINC01555Q8NAE3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01555Q8NAE3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01555Q8NAE3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.07■□□□□ 0.8
LINC01555Q8NAE3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01555Q8NAE3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01555Q8NAE3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.07■□□□□ 0.8
LINC01555Q8NAE3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.06■□□□□ 0.8
LINC01555Q8NAE3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01555Q8NAE3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01555Q8NAE3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01555Q8NAE3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01555Q8NAE3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.05■□□□□ 0.8
LINC01555Q8NAE3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.05■□□□□ 0.8
LINC01555Q8NAE3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.05■□□□□ 0.8
LINC01555Q8NAE3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01555Q8NAE3 AL591742.1-201ENST00000604433 565 ntBASIC20.05■□□□□ 0.8
LINC01555Q8NAE3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.05■□□□□ 0.8
LINC01555Q8NAE3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01555Q8NAE3 AC005229.4-201ENST00000610085 2198 ntBASIC20.05■□□□□ 0.8
LINC01555Q8NAE3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01555Q8NAE3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LINC01555Q8NAE3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.05■□□□□ 0.8
LINC01555Q8NAE3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 CYP2T1P-201ENST00000432607 1285 ntBASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 AC016405.3-201ENST00000607710 860 ntBASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01555Q8NAE3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.03■□□□□ 0.8
LINC01555Q8NAE3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01555Q8NAE3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LINC01555Q8NAE3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01555Q8NAE3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01555Q8NAE3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01555Q8NAE3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.03■□□□□ 0.8
LINC01555Q8NAE3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
LINC01555Q8NAE3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01555Q8NAE3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01555Q8NAE3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.03■□□□□ 0.8
LINC01555Q8NAE3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01555Q8NAE3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LINC01555Q8NAE3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01555Q8NAE3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01555Q8NAE3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LINC01555Q8NAE3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01555Q8NAE3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.02■□□□□ 0.8
LINC01555Q8NAE3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01555Q8NAE3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01555Q8NAE3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01555Q8NAE3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01555Q8NAE3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01555Q8NAE3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01555Q8NAE3 AC006970.2-201ENST00000450065 779 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms