Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 KRT16P2-201ENST00000414673 1423 ntBASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC9CQ8N5M4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 AC097381.1-201ENST00000429019 1296 ntBASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 KRT18P20-201ENST00000548986 1279 ntBASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 AP001160.3-201ENST00000601484 763 ntBASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 SLC25A24-204ENST00000569674 2357 ntBASIC16.4■□□□□ 0.22
TTC9CQ8N5M4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TTC9CQ8N5M4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 AC004854.2-201ENST00000608450 1441 ntBASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TTC9CQ8N5M4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9CQ8N5M4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9CQ8N5M4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9CQ8N5M4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TTC9CQ8N5M4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9CQ8N5M4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9CQ8N5M4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.38■□□□□ 0.21
TTC9CQ8N5M4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.38■□□□□ 0.21
TTC9CQ8N5M4 MIR6821-201ENST00000617625 74 ntBASIC16.38■□□□□ 0.21
TTC9CQ8N5M4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TTC9CQ8N5M4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9CQ8N5M4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9CQ8N5M4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9CQ8N5M4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9CQ8N5M4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TTC9CQ8N5M4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC9CQ8N5M4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 KRT19P1-201ENST00000405746 1186 ntBASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 AC034268.1-201ENST00000441047 882 ntBASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC9CQ8N5M4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.36■□□□□ 0.21
TTC9CQ8N5M4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.36■□□□□ 0.21
TTC9CQ8N5M4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.36■□□□□ 0.21
TTC9CQ8N5M4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TTC9CQ8N5M4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC9CQ8N5M4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms