Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TMEFF1Q8IYR6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 AC092368.3-202ENST00000574180 1591 ntBASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 KRT17P3-201ENST00000420566 1262 ntBASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TMEFF1Q8IYR6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 C11orf96-202ENST00000528572 1834 ntBASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 AC092053.2-201ENST00000640557 1818 ntBASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 MIR718-201ENST00000390190 70 ntBASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 AC068473.5-201ENST00000616428 2072 ntBASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TMEFF1Q8IYR6 AC133561.1-201ENST00000568600 2415 ntBASIC20.7■□□□□ 0.91
TMEFF1Q8IYR6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEFF1Q8IYR6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TMEFF1Q8IYR6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEFF1Q8IYR6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEFF1Q8IYR6 KRT18P68-201ENST00000392293 1000 ntBASIC20.7■□□□□ 0.9
TMEFF1Q8IYR6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
TMEFF1Q8IYR6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.7■□□□□ 0.9
TMEFF1Q8IYR6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TMEFF1Q8IYR6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEFF1Q8IYR6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEFF1Q8IYR6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEFF1Q8IYR6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEFF1Q8IYR6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEFF1Q8IYR6 AC026471.6-201ENST00000622954 1905 ntBASIC20.69■□□□□ 0.9
TMEFF1Q8IYR6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEFF1Q8IYR6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEFF1Q8IYR6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEFF1Q8IYR6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.69■□□□□ 0.9
TMEFF1Q8IYR6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.69■□□□□ 0.9
TMEFF1Q8IYR6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.69■□□□□ 0.9
TMEFF1Q8IYR6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEFF1Q8IYR6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEFF1Q8IYR6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEFF1Q8IYR6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TMEFF1Q8IYR6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEFF1Q8IYR6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEFF1Q8IYR6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEFF1Q8IYR6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEFF1Q8IYR6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEFF1Q8IYR6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEFF1Q8IYR6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEFF1Q8IYR6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEFF1Q8IYR6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEFF1Q8IYR6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.68■□□□□ 0.9
TMEFF1Q8IYR6 AC233263.1-201ENST00000578059 224 ntBASIC20.68■□□□□ 0.9
TMEFF1Q8IYR6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEFF1Q8IYR6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEFF1Q8IYR6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 SOX15-203ENST00000570788 1093 ntBASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 RN7SL471P-201ENST00000580476 299 ntBASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 MIR4497-201ENST00000583208 89 ntBASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms