Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM50Q86XT4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.23■■□□□ 1.31
TRIM50Q86XT4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM50Q86XT4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM50Q86XT4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM50Q86XT4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.23■■□□□ 1.31
TRIM50Q86XT4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM50Q86XT4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM50Q86XT4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM50Q86XT4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM50Q86XT4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.22■■□□□ 1.31
TRIM50Q86XT4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.22■■□□□ 1.31
TRIM50Q86XT4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM50Q86XT4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM50Q86XT4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM50Q86XT4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM50Q86XT4 POU5F1P3-201ENST00000428824 1078 ntBASIC23.22■■□□□ 1.31
TRIM50Q86XT4 AC097658.1-201ENST00000475555 843 ntBASIC23.22■■□□□ 1.31
TRIM50Q86XT4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM50Q86XT4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM50Q86XT4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
TRIM50Q86XT4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM50Q86XT4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM50Q86XT4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM50Q86XT4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.22■■□□□ 1.31
TRIM50Q86XT4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.21■■□□□ 1.31
TRIM50Q86XT4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM50Q86XT4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM50Q86XT4 CDV3P1-201ENST00000471403 739 ntBASIC23.21■■□□□ 1.31
TRIM50Q86XT4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.21■■□□□ 1.31
TRIM50Q86XT4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.21■■□□□ 1.31
TRIM50Q86XT4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
TRIM50Q86XT4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM50Q86XT4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TRIM50Q86XT4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM50Q86XT4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.21■■□□□ 1.31
TRIM50Q86XT4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.21■■□□□ 1.31
TRIM50Q86XT4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM50Q86XT4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.21■■□□□ 1.31
TRIM50Q86XT4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM50Q86XT4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
TRIM50Q86XT4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM50Q86XT4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM50Q86XT4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.19■■□□□ 1.3
TRIM50Q86XT4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM50Q86XT4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.19■■□□□ 1.3
TRIM50Q86XT4 LSM12P1-201ENST00000411836 588 ntBASIC23.19■■□□□ 1.3
TRIM50Q86XT4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM50Q86XT4 ECEL1P1-201ENST00000373592 1742 ntBASIC23.19■■□□□ 1.3
TRIM50Q86XT4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.18■■□□□ 1.3
TRIM50Q86XT4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 CYP2T3P-201ENST00000601990 817 ntBASIC23.18■■□□□ 1.3
TRIM50Q86XT4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM50Q86XT4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM50Q86XT4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIM50Q86XT4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.17■■□□□ 1.3
TRIM50Q86XT4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
TRIM50Q86XT4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIM50Q86XT4 AC008687.6-201ENST00000596318 630 ntBASIC23.17■■□□□ 1.3
TRIM50Q86XT4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM50Q86XT4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms