Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 REXO1L12P-201ENST00000622156 912 ntBASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13BQ7Z7G8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 AL591742.1-201ENST00000604433 565 ntBASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 AL353708.3-201ENST00000610272 989 ntBASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC12.93□□□□□ -0.34
VPS13BQ7Z7G8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 AL355075.4-201ENST00000554988 638 ntBASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 AC060766.5-201ENST00000590539 871 ntBASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 AC068473.5-201ENST00000616428 2072 ntBASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13BQ7Z7G8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 AC233702.5-201ENST00000584107 538 ntBASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 AL049637.2-201ENST00000641778 930 ntBASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 AC133561.5-201ENST00000635547 218 ntBASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 311.3 ms