Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAI1Q7Z5J4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAI1Q7Z5J4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.85■□□□□ 0.45
RAI1Q7Z5J4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAI1Q7Z5J4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAI1Q7Z5J4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAI1Q7Z5J4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 CYP2T3P-201ENST00000601990 817 ntBASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 ESRRAP1-201ENST00000400596 1257 ntBASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAI1Q7Z5J4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RAI1Q7Z5J4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAI1Q7Z5J4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAI1Q7Z5J4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
RAI1Q7Z5J4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.83■□□□□ 0.45
RAI1Q7Z5J4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAI1Q7Z5J4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.83■□□□□ 0.44
RAI1Q7Z5J4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RAI1Q7Z5J4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.83■□□□□ 0.44
RAI1Q7Z5J4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAI1Q7Z5J4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.83■□□□□ 0.44
RAI1Q7Z5J4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RAI1Q7Z5J4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RAI1Q7Z5J4 FAM21FP-204ENST00000608637 956 ntBASIC17.83■□□□□ 0.44
RAI1Q7Z5J4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAI1Q7Z5J4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RAI1Q7Z5J4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAI1Q7Z5J4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAI1Q7Z5J4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.83■□□□□ 0.44
RAI1Q7Z5J4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAI1Q7Z5J4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAI1Q7Z5J4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 AC007322.3-201ENST00000426526 701 ntBASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 AC100791.3-201ENST00000617619 330 ntBASIC17.82■□□□□ 0.44
RAI1Q7Z5J4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAI1Q7Z5J4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAI1Q7Z5J4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAI1Q7Z5J4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.81■□□□□ 0.44
RAI1Q7Z5J4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RAI1Q7Z5J4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.81■□□□□ 0.44
RAI1Q7Z5J4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAI1Q7Z5J4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAI1Q7Z5J4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAI1Q7Z5J4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.81■□□□□ 0.44
RAI1Q7Z5J4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.81■□□□□ 0.44
RAI1Q7Z5J4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.81■□□□□ 0.44
RAI1Q7Z5J4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
RAI1Q7Z5J4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAI1Q7Z5J4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 AL158047.1-201ENST00000445918 881 ntBASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.8■□□□□ 0.44
RAI1Q7Z5J4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms