Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf139Q6ZV77 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 FAM99A-202ENST00000538190 1989 ntBASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 KRT18P29-201ENST00000397031 1267 ntBASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 CYP2T3P-201ENST00000601990 817 ntBASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 AC010542.4-201ENST00000563151 1910 ntBASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 AC026471.6-201ENST00000622954 1905 ntBASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf139Q6ZV77 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.79■□□□□ 0.28
C9orf139Q6ZV77 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf139Q6ZV77 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf139Q6ZV77 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf139Q6ZV77 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf139Q6ZV77 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf139Q6ZV77 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.79■□□□□ 0.28
C9orf139Q6ZV77 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.79■□□□□ 0.28
C9orf139Q6ZV77 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.79■□□□□ 0.28
C9orf139Q6ZV77 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.79■□□□□ 0.28
C9orf139Q6ZV77 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.79■□□□□ 0.28
C9orf139Q6ZV77 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.79■□□□□ 0.28
C9orf139Q6ZV77 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf139Q6ZV77 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf139Q6ZV77 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf139Q6ZV77 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf139Q6ZV77 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 C11orf96-202ENST00000528572 1834 ntBASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 MCRIP2P1-201ENST00000394346 511 ntBASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf139Q6ZV77 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 ECEL1P1-201ENST00000373592 1742 ntBASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 AC008687.6-201ENST00000596318 630 ntBASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.77■□□□□ 0.28
C9orf139Q6ZV77 AL589743.5-201ENST00000616611 1050 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms