Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.21■□□□□ 0.35
CSPG4Q6UVK1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.21■□□□□ 0.35
CSPG4Q6UVK1 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.21■□□□□ 0.35
CSPG4Q6UVK1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.21■□□□□ 0.35
CSPG4Q6UVK1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.21■□□□□ 0.35
CSPG4Q6UVK1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CSPG4Q6UVK1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CSPG4Q6UVK1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG4Q6UVK1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG4Q6UVK1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG4Q6UVK1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.21■□□□□ 0.34
CSPG4Q6UVK1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 AC233702.5-201ENST00000584107 538 ntBASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 MTDHP1-201ENST00000605323 784 ntBASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 AC012306.2-201ENST00000609350 630 ntBASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 AC061975.6-201ENST00000579045 1553 ntBASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 RN7SL850P-201ENST00000579959 291 ntBASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG4Q6UVK1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 AL135905.2-201ENST00000584934 1404 ntBASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 KRT17P2-201ENST00000300992 1314 ntBASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 KRT18P35-201ENST00000510488 1269 ntBASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 AC139530.1-201ENST00000575312 1977 ntBASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSPG4Q6UVK1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG4Q6UVK1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.18■□□□□ 0.34
CSPG4Q6UVK1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG4Q6UVK1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG4Q6UVK1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CSPG4Q6UVK1 TSPY15P-201ENST00000457163 923 ntBASIC17.18■□□□□ 0.34
CSPG4Q6UVK1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.18■□□□□ 0.34
CSPG4Q6UVK1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG4Q6UVK1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG4Q6UVK1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG4Q6UVK1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.18■□□□□ 0.34
CSPG4Q6UVK1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG4Q6UVK1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSPG4Q6UVK1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.18■□□□□ 0.34
CSPG4Q6UVK1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG4Q6UVK1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.17■□□□□ 0.34
CSPG4Q6UVK1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.17■□□□□ 0.34
CSPG4Q6UVK1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.17■□□□□ 0.34
CSPG4Q6UVK1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG4Q6UVK1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.17■□□□□ 0.34
CSPG4Q6UVK1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.17■□□□□ 0.34
CSPG4Q6UVK1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.17■□□□□ 0.34
CSPG4Q6UVK1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.17■□□□□ 0.34
CSPG4Q6UVK1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CSPG4Q6UVK1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSPG4Q6UVK1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CSPG4Q6UVK1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.17■□□□□ 0.34
CSPG4Q6UVK1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CSPG4Q6UVK1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 AC133681.1-201ENST00000465482 601 ntBASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 AL355075.4-201ENST00000554988 638 ntBASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 MIR4785-201ENST00000585005 73 ntBASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4Q6UVK1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms