Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQA1Q5Y7H0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.39■□□□□ 0.69
HLA-DQA1Q5Y7H0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQA1Q5Y7H0 AC006015.1-201ENST00000429970 570 ntBASIC19.39■□□□□ 0.69
HLA-DQA1Q5Y7H0 AC245052.3-201ENST00000450182 901 ntBASIC19.39■□□□□ 0.69
HLA-DQA1Q5Y7H0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.39■□□□□ 0.69
HLA-DQA1Q5Y7H0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQA1Q5Y7H0 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.39■□□□□ 0.69
HLA-DQA1Q5Y7H0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQA1Q5Y7H0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQA1Q5Y7H0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQA1Q5Y7H0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQA1Q5Y7H0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HLA-DQA1Q5Y7H0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQA1Q5Y7H0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HLA-DQA1Q5Y7H0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQA1Q5Y7H0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQA1Q5Y7H0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQA1Q5Y7H0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQA1Q5Y7H0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQA1Q5Y7H0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQA1Q5Y7H0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQA1Q5Y7H0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.38■□□□□ 0.69
HLA-DQA1Q5Y7H0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.38■□□□□ 0.69
HLA-DQA1Q5Y7H0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQA1Q5Y7H0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.38■□□□□ 0.69
HLA-DQA1Q5Y7H0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
HLA-DQA1Q5Y7H0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQA1Q5Y7H0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
HLA-DQA1Q5Y7H0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 AC004911.1-201ENST00000416316 871 ntBASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DQA1Q5Y7H0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 AC011767.1-201ENST00000617410 1153 ntBASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQA1Q5Y7H0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HLA-DQA1Q5Y7H0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HLA-DQA1Q5Y7H0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQA1Q5Y7H0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
HLA-DQA1Q5Y7H0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQA1Q5Y7H0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQA1Q5Y7H0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DQA1Q5Y7H0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.35■□□□□ 0.69
HLA-DQA1Q5Y7H0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HLA-DQA1Q5Y7H0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.35■□□□□ 0.69
HLA-DQA1Q5Y7H0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DQA1Q5Y7H0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.35■□□□□ 0.69
HLA-DQA1Q5Y7H0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.35■□□□□ 0.69
HLA-DQA1Q5Y7H0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQA1Q5Y7H0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQA1Q5Y7H0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQA1Q5Y7H0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.34■□□□□ 0.69
HLA-DQA1Q5Y7H0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.34■□□□□ 0.69
HLA-DQA1Q5Y7H0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQA1Q5Y7H0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.34■□□□□ 0.69
HLA-DQA1Q5Y7H0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.34■□□□□ 0.69
HLA-DQA1Q5Y7H0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-DQA1Q5Y7H0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQA1Q5Y7H0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQA1Q5Y7H0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-DQA1Q5Y7H0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.34■□□□□ 0.69
HLA-DQA1Q5Y7H0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQA1Q5Y7H0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms