Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 POM121L13P-201ENST00000422362 380 ntBASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 CYP21A1P-202ENST00000354927 1481 ntBASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD4Q5XG99 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD4Q5XG99 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD4Q5XG99 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD4Q5XG99 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD4Q5XG99 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD4Q5XG99 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD4Q5XG99 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD4Q5XG99 AC105020.6-201ENST00000621523 1217 ntBASIC20.52■□□□□ 0.88
LYSMD4Q5XG99 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD4Q5XG99 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.52■□□□□ 0.87
LYSMD4Q5XG99 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.51■□□□□ 0.87
LYSMD4Q5XG99 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LYSMD4Q5XG99 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.51■□□□□ 0.87
LYSMD4Q5XG99 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.51■□□□□ 0.87
LYSMD4Q5XG99 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD4Q5XG99 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD4Q5XG99 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.51■□□□□ 0.87
LYSMD4Q5XG99 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD4Q5XG99 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD4Q5XG99 REXO1L12P-201ENST00000622156 912 ntBASIC20.51■□□□□ 0.87
LYSMD4Q5XG99 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD4Q5XG99 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.51■□□□□ 0.87
LYSMD4Q5XG99 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.51■□□□□ 0.87
LYSMD4Q5XG99 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD4Q5XG99 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD4Q5XG99 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LYSMD4Q5XG99 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 AC211429.1-201ENST00000415277 523 ntBASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.49■□□□□ 0.87
LYSMD4Q5XG99 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 FAM210CP-201ENST00000445714 574 ntBASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYSMD4Q5XG99 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 AC026471.6-201ENST00000622954 1905 ntBASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LYSMD4Q5XG99 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms