Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC25.09■■□□□ 1.61
PDS5AQ29RF7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC25.09■■□□□ 1.61
PDS5AQ29RF7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PDS5AQ29RF7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDS5AQ29RF7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PDS5AQ29RF7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDS5AQ29RF7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PDS5AQ29RF7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PDS5AQ29RF7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
PDS5AQ29RF7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDS5AQ29RF7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
PDS5AQ29RF7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC25.08■■□□□ 1.61
PDS5AQ29RF7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDS5AQ29RF7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
PDS5AQ29RF7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC25.08■■□□□ 1.6
PDS5AQ29RF7 TSPY20P-201ENST00000450910 630 ntBASIC25.08■■□□□ 1.6
PDS5AQ29RF7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC25.08■■□□□ 1.6
PDS5AQ29RF7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC25.08■■□□□ 1.6
PDS5AQ29RF7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC25.08■■□□□ 1.6
PDS5AQ29RF7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PDS5AQ29RF7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
PDS5AQ29RF7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PDS5AQ29RF7 CYP21A1P-202ENST00000354927 1481 ntBASIC25.07■■□□□ 1.6
PDS5AQ29RF7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDS5AQ29RF7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
PDS5AQ29RF7 AC244015.2-201ENST00000616358 1861 ntBASIC25.07■■□□□ 1.6
PDS5AQ29RF7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
PDS5AQ29RF7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDS5AQ29RF7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDS5AQ29RF7 LSM12P1-201ENST00000411836 588 ntBASIC25.07■■□□□ 1.6
PDS5AQ29RF7 AL355472.2-201ENST00000422958 438 ntBASIC25.07■■□□□ 1.6
PDS5AQ29RF7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC25.07■■□□□ 1.6
PDS5AQ29RF7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PDS5AQ29RF7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PDS5AQ29RF7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PDS5AQ29RF7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PDS5AQ29RF7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.06■■□□□ 1.6
PDS5AQ29RF7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PDS5AQ29RF7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC25.06■■□□□ 1.6
PDS5AQ29RF7 SERPINH1P1-201ENST00000419794 1249 ntBASIC25.06■■□□□ 1.6
PDS5AQ29RF7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC25.06■■□□□ 1.6
PDS5AQ29RF7 AL589743.5-201ENST00000616611 1050 ntBASIC25.06■■□□□ 1.6
PDS5AQ29RF7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PDS5AQ29RF7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PDS5AQ29RF7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
PDS5AQ29RF7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PDS5AQ29RF7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PDS5AQ29RF7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC25.05■■□□□ 1.6
PDS5AQ29RF7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC25.05■■□□□ 1.6
PDS5AQ29RF7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC25.05■■□□□ 1.6
PDS5AQ29RF7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC25.05■■□□□ 1.6
PDS5AQ29RF7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC25.05■■□□□ 1.6
PDS5AQ29RF7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
PDS5AQ29RF7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
PDS5AQ29RF7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.04■■□□□ 1.6
PDS5AQ29RF7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.04■■□□□ 1.6
PDS5AQ29RF7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PDS5AQ29RF7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PDS5AQ29RF7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PDS5AQ29RF7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.04■■□□□ 1.6
PDS5AQ29RF7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
PDS5AQ29RF7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC25.04■■□□□ 1.6
PDS5AQ29RF7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC25.04■■□□□ 1.6
PDS5AQ29RF7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.04■■□□□ 1.6
PDS5AQ29RF7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
PDS5AQ29RF7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.03■■□□□ 1.6
PDS5AQ29RF7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PDS5AQ29RF7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PDS5AQ29RF7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PDS5AQ29RF7 KRT18P68-201ENST00000392293 1000 ntBASIC25.03■■□□□ 1.6
PDS5AQ29RF7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PDS5AQ29RF7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.03■■□□□ 1.6
PDS5AQ29RF7 OR2A1-AS1-201ENST00000462305 773 ntBASIC25.03■■□□□ 1.6
PDS5AQ29RF7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC25.03■■□□□ 1.6
PDS5AQ29RF7 RNA5SP413-201ENST00000516373 109 ntBASIC25.03■■□□□ 1.6
PDS5AQ29RF7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC25.03■■□□□ 1.6
PDS5AQ29RF7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PDS5AQ29RF7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PDS5AQ29RF7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PDS5AQ29RF7 TMEM191A-211ENST00000637163 1067 ntBASIC25.02■■□□□ 1.6
PDS5AQ29RF7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms