Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 MST27YGL051W 705 nt3.05□□□□□ -1.92
VPS38Q05919 RPL17BYJL177W 555 nt3.05□□□□□ -1.92
VPS38Q05919 PRP21YJL203W 843 nt3.05□□□□□ -1.92
VPS38Q05919 VPS63YLR261C 327 nt3.05□□□□□ -1.92
VPS38Q05919 YPR147CYPR147C 915 nt3.05□□□□□ -1.92
VPS38Q05919 NTC20YBR188C 423 nt3.05□□□□□ -1.92
VPS38Q05919 TAO3YIL129C 7131 nt3.05□□□□□ -1.92
VPS38Q05919 CIK1YMR198W 1785 nt3.05□□□□□ -1.92
VPS38Q05919 BNA4YBL098W 1383 nt3.04□□□□□ -1.92
VPS38Q05919 SEC7YDR170C 6030 nt3.04□□□□□ -1.92
VPS38Q05919 YDR442WYDR442W 393 nt3.04□□□□□ -1.92
VPS38Q05919 MIC19YFR011C 513 nt3.04□□□□□ -1.92
VPS38Q05919 ASG7YJL170C 630 nt3.04□□□□□ -1.92
VPS38Q05919 ECM9YKR004C 1134 nt3.04□□□□□ -1.92
VPS38Q05919 YKR033CYKR033C 426 nt3.04□□□□□ -1.92
VPS38Q05919 ATG38YLR211C 681 nt3.04□□□□□ -1.92
VPS38Q05919 RIM9YMR063W 720 nt3.04□□□□□ -1.92
VPS38Q05919 YOL029CYOL029C 606 nt3.04□□□□□ -1.92
VPS38Q05919 SGT1YOR057W 1188 nt3.04□□□□□ -1.92
VPS38Q05919 AFT2YPL202C 1251 nt3.04□□□□□ -1.92
VPS38Q05919 RPA190YOR341W 4995 nt3.04□□□□□ -1.92
VPS38Q05919 DIA2YOR080W 2199 nt3.04□□□□□ -1.92
VPS38Q05919 ASI3YNL008C 2031 nt3.03□□□□□ -1.92
VPS38Q05919 ECM29YHL030W 5607 nt3.03□□□□□ -1.92
VPS38Q05919 YKL075CYKL075C 1353 nt3.03□□□□□ -1.92
VPS38Q05919 YDR034C-DYDR034C-D 5313 nt3.03□□□□□ -1.92
VPS38Q05919 PNC1YGL037C 651 nt3.03□□□□□ -1.92
VPS38Q05919 YHR214C-DYHR214C-D 294 nt3.03□□□□□ -1.92
VPS38Q05919 YIL174WYIL174W 228 nt3.03□□□□□ -1.92
VPS38Q05919 YJL222W-AYJL222W-A 228 nt3.03□□□□□ -1.92
VPS38Q05919 YLR271WYLR271W 825 nt3.03□□□□□ -1.92
VPS38Q05919 YAR069CYAR069C 294 nt3.03□□□□□ -1.92
VPS38Q05919 RPL23AYBL087C 414 nt3.03□□□□□ -1.92
VPS38Q05919 TPK2YPL203W 1143 nt3.03□□□□□ -1.92
VPS38Q05919 TIM12YBR091C 330 nt3.03□□□□□ -1.92
VPS38Q05919 SEC66YBR171W 621 nt3.03□□□□□ -1.92
VPS38Q05919 SWD3YBR175W 948 nt3.03□□□□□ -1.92
VPS38Q05919 PFF1YBR074W 2931 nt3.03□□□□□ -1.92
VPS38Q05919 ATP22YDR350C 2055 nt3.03□□□□□ -1.92
VPS38Q05919 SKO1YNL167C 1944 nt3.03□□□□□ -1.92
VPS38Q05919 TOM70YNL121C 1854 nt3.03□□□□□ -1.93
VPS38Q05919 TSC11YER093C 4293 nt3.02□□□□□ -1.93
VPS38Q05919 YJL132WYJL132W 2253 nt3.02□□□□□ -1.93
VPS38Q05919 SNA4YDL123W 423 nt3.02□□□□□ -1.93
VPS38Q05919 YDL163WYDL163W 303 nt3.02□□□□□ -1.93
VPS38Q05919 RMT2YDR465C 1239 nt3.02□□□□□ -1.93
VPS38Q05919 VMA8YEL051W 771 nt3.02□□□□□ -1.93
VPS38Q05919 MRPL38YKL170W 417 nt3.02□□□□□ -1.93
VPS38Q05919 CSI1YMR025W 888 nt3.02□□□□□ -1.93
VPS38Q05919 YOR073W-AYOR073W-A 234 nt3.02□□□□□ -1.93
VPS38Q05919 AVT2YEL064C 1443 nt3.02□□□□□ -1.93
VPS38Q05919 SHS1YDL225W 1656 nt3.01□□□□□ -1.93
VPS38Q05919 DAD1YDR016C 285 nt3.01□□□□□ -1.93
VPS38Q05919 YDR461C-AYDR461C-A 243 nt3.01□□□□□ -1.93
VPS38Q05919 TMA20YER007C-A 546 nt3.01□□□□□ -1.93
VPS38Q05919 YGL159WYGL159W 1113 nt3.01□□□□□ -1.93
VPS38Q05919 PRP38YGR075C 729 nt3.01□□□□□ -1.93
VPS38Q05919 YNL203CYNL203C 612 nt3.01□□□□□ -1.93
VPS38Q05919 MIX23YBL107C 591 nt3.01□□□□□ -1.93
VPS38Q05919 YPR170CYPR170C 336 nt3.01□□□□□ -1.93
VPS38Q05919 JJJ2YJL162C 1752 nt3.01□□□□□ -1.93
VPS38Q05919 EXO84YBR102C 2262 nt3.01□□□□□ -1.93
VPS38Q05919 VAS1YGR094W 3315 nt3.01□□□□□ -1.93
VPS38Q05919 SRB4YER022W 2064 nt3□□□□□ -1.93
VPS38Q05919 RAX2YLR084C 3663 nt3□□□□□ -1.93
VPS38Q05919 AXL1YPR122W 3627 nt3□□□□□ -1.93
VPS38Q05919 VHR1YIL056W 1923 nt3□□□□□ -1.93
VPS38Q05919 HMF1YER057C 390 nt3□□□□□ -1.93
VPS38Q05919 RPL23BYER117W 414 nt3□□□□□ -1.93
VPS38Q05919 RPL14BYHL001W 417 nt3□□□□□ -1.93
VPS38Q05919 PEX18YHR160C 852 nt3□□□□□ -1.93
VPS38Q05919 Q0017Q0017 162 nt3□□□□□ -1.93
VPS38Q05919 ADY4YLR227C 1482 nt2.99□□□□□ -1.93
VPS38Q05919 tF(GAA)DtF(GAA)D 73 nt2.99□□□□□ -1.93
VPS38Q05919 tF(GAA)NtF(GAA)N 73 nt2.99□□□□□ -1.93
VPS38Q05919 YIP5YGL161C 933 nt2.99□□□□□ -1.93
VPS38Q05919 YGR109W-AYGR109W-A 873 nt2.99□□□□□ -1.93
VPS38Q05919 RPL27AYHR010W 411 nt2.99□□□□□ -1.93
VPS38Q05919 YIL082WYIL082W 873 nt2.99□□□□□ -1.93
VPS38Q05919 YIR036W-AYIR036W-A 402 nt2.99□□□□□ -1.93
VPS38Q05919 SFT1YKL006C-A 294 nt2.99□□□□□ -1.93
VPS38Q05919 YMR316C-AYMR316C-A 312 nt2.99□□□□□ -1.93
VPS38Q05919 YNL235CYNL235C 432 nt2.99□□□□□ -1.93
VPS38Q05919 YBR051WYBR051W 351 nt2.99□□□□□ -1.93
VPS38Q05919 YDR338CYDR338C 2088 nt2.99□□□□□ -1.93
VPS38Q05919 ESL2YKR096W 3588 nt2.98□□□□□ -1.93
VPS38Q05919 MIX14YDR031W 366 nt2.98□□□□□ -1.93
VPS38Q05919 OCA6YDR067C 675 nt2.98□□□□□ -1.93
VPS38Q05919 JIP3YLR331C 378 nt2.98□□□□□ -1.93
VPS38Q05919 NGL1YOL042W 1092 nt2.98□□□□□ -1.93
VPS38Q05919 YBR062CYBR062C 543 nt2.98□□□□□ -1.93
VPS38Q05919 MUD1YBR119W 897 nt2.98□□□□□ -1.93
VPS38Q05919 MAL33YBR297W 1407 nt2.98□□□□□ -1.93
VPS38Q05919 MED1YPR070W 1701 nt2.98□□□□□ -1.93
VPS38Q05919 UBX3YDL091C 1368 nt2.98□□□□□ -1.93
VPS38Q05919 VPS30YPL120W 1674 nt2.98□□□□□ -1.93
VPS38Q05919 TAF2YCR042C 4224 nt2.98□□□□□ -1.93
VPS38Q05919 snR5snR5 204 nt2.97□□□□□ -1.93
VPS38Q05919 FAR7YFR008W 666 nt2.97□□□□□ -1.93
VPS38Q05919 VMA6YLR447C 1038 nt2.97□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 22.2 ms