Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLRN1P58418 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLRN1P58418 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CLRN1P58418 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLRN1P58418 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLRN1P58418 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLRN1P58418 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLRN1P58418 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CLRN1P58418 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLRN1P58418 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLRN1P58418 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLRN1P58418 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLRN1P58418 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLRN1P58418 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLRN1P58418 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLRN1P58418 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLRN1P58418 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.53■□□□□ 0.56
CLRN1P58418 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLRN1P58418 AC010141.2-201ENST00000452426 721 ntBASIC18.53■□□□□ 0.56
CLRN1P58418 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLRN1P58418 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.53■□□□□ 0.56
CLRN1P58418 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.53■□□□□ 0.56
CLRN1P58418 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.53■□□□□ 0.56
CLRN1P58418 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.53■□□□□ 0.56
CLRN1P58418 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.53■□□□□ 0.56
CLRN1P58418 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.53■□□□□ 0.56
CLRN1P58418 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.53■□□□□ 0.56
CLRN1P58418 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CLRN1P58418 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLRN1P58418 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CLRN1P58418 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.52■□□□□ 0.56
CLRN1P58418 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
CLRN1P58418 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.52■□□□□ 0.56
CLRN1P58418 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.52■□□□□ 0.56
CLRN1P58418 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLRN1P58418 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLRN1P58418 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLRN1P58418 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLRN1P58418 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
CLRN1P58418 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLRN1P58418 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLRN1P58418 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.52■□□□□ 0.56
CLRN1P58418 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLRN1P58418 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.52■□□□□ 0.56
CLRN1P58418 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLRN1P58418 AP001160.3-201ENST00000601484 763 ntBASIC18.52■□□□□ 0.56
CLRN1P58418 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CLRN1P58418 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLRN1P58418 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLRN1P58418 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
CLRN1P58418 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CLRN1P58418 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 AC004854.2-201ENST00000608450 1441 ntBASIC18.51■□□□□ 0.55
CLRN1P58418 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CLRN1P58418 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.51■□□□□ 0.55
CLRN1P58418 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.51■□□□□ 0.55
CLRN1P58418 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.51■□□□□ 0.55
CLRN1P58418 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLRN1P58418 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.51■□□□□ 0.55
CLRN1P58418 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLRN1P58418 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.5■□□□□ 0.55
CLRN1P58418 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLRN1P58418 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLRN1P58418 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLRN1P58418 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLRN1P58418 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLRN1P58418 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLRN1P58418 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.5■□□□□ 0.55
CLRN1P58418 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLRN1P58418 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLRN1P58418 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLRN1P58418 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.5■□□□□ 0.55
CLRN1P58418 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLRN1P58418 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLRN1P58418 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLRN1P58418 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLRN1P58418 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLRN1P58418 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLRN1P58418 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLRN1P58418 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLRN1P58418 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLRN1P58418 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLRN1P58418 KRT16P2-201ENST00000414673 1423 ntBASIC18.49■□□□□ 0.55
CLRN1P58418 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLRN1P58418 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms