Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN6P56747 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CLDN6P56747 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN6P56747 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.01■□□□□ 0.79
CLDN6P56747 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CLDN6P56747 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.01■□□□□ 0.79
CLDN6P56747 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.01■□□□□ 0.79
CLDN6P56747 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.01■□□□□ 0.79
CLDN6P56747 RN7SL471P-201ENST00000580476 299 ntBASIC20.01■□□□□ 0.79
CLDN6P56747 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.01■□□□□ 0.79
CLDN6P56747 FAM21FP-204ENST00000608637 956 ntBASIC20.01■□□□□ 0.79
CLDN6P56747 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN6P56747 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN6P56747 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN6P56747 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CLDN6P56747 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN6P56747 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20■□□□□ 0.79
CLDN6P56747 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CLDN6P56747 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN6P56747 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN6P56747 C11orf96-202ENST00000528572 1834 ntBASIC20■□□□□ 0.79
CLDN6P56747 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN6P56747 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CLDN6P56747 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20■□□□□ 0.79
CLDN6P56747 SLC29A4P2-201ENST00000504749 1089 ntBASIC20■□□□□ 0.79
CLDN6P56747 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20■□□□□ 0.79
CLDN6P56747 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20■□□□□ 0.79
CLDN6P56747 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20■□□□□ 0.79
CLDN6P56747 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20■□□□□ 0.79
CLDN6P56747 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
CLDN6P56747 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN6P56747 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN6P56747 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.99■□□□□ 0.79
CLDN6P56747 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN6P56747 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CLDN6P56747 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN6P56747 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN6P56747 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN6P56747 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CLDN6P56747 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN6P56747 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN6P56747 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.99■□□□□ 0.79
CLDN6P56747 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.99■□□□□ 0.79
CLDN6P56747 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN6P56747 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN6P56747 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.99■□□□□ 0.79
CLDN6P56747 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CLDN6P56747 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN6P56747 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN6P56747 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.98■□□□□ 0.79
CLDN6P56747 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN6P56747 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN6P56747 KRT17P3-201ENST00000420566 1262 ntBASIC19.98■□□□□ 0.79
CLDN6P56747 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
CLDN6P56747 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.98■□□□□ 0.79
CLDN6P56747 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CLDN6P56747 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.98■□□□□ 0.79
CLDN6P56747 KRT18P21-201ENST00000515767 1272 ntBASIC19.98■□□□□ 0.79
CLDN6P56747 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.98■□□□□ 0.79
CLDN6P56747 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
CLDN6P56747 AC069544.1-201ENST00000609399 999 ntBASIC19.98■□□□□ 0.79
CLDN6P56747 AL589743.5-201ENST00000616611 1050 ntBASIC19.98■□□□□ 0.79
CLDN6P56747 REXO1L12P-201ENST00000622156 912 ntBASIC19.98■□□□□ 0.79
CLDN6P56747 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.98■□□□□ 0.79
CLDN6P56747 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN6P56747 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN6P56747 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN6P56747 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLDN6P56747 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN6P56747 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CLDN6P56747 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.98■□□□□ 0.79
CLDN6P56747 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN6P56747 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.97■□□□□ 0.79
CLDN6P56747 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.97■□□□□ 0.79
CLDN6P56747 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN6P56747 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
CLDN6P56747 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN6P56747 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.97■□□□□ 0.79
CLDN6P56747 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN6P56747 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.97■□□□□ 0.79
CLDN6P56747 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN6P56747 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CLDN6P56747 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.97■□□□□ 0.79
CLDN6P56747 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.96■□□□□ 0.79
CLDN6P56747 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN6P56747 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN6P56747 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN6P56747 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN6P56747 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN6P56747 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CLDN6P56747 FAM210CP-201ENST00000445714 574 ntBASIC19.96■□□□□ 0.79
CLDN6P56747 AC245052.3-201ENST00000450182 901 ntBASIC19.96■□□□□ 0.79
CLDN6P56747 CDV3P1-201ENST00000471403 739 ntBASIC19.96■□□□□ 0.79
CLDN6P56747 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.96■□□□□ 0.79
CLDN6P56747 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.96■□□□□ 0.79
CLDN6P56747 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.96■□□□□ 0.79
CLDN6P56747 AC010331.1-201ENST00000611423 582 ntBASIC19.96■□□□□ 0.79
CLDN6P56747 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN6P56747 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN6P56747 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms