Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDX1P52945 AC091874.3-201ENST00000512672 1195 ntBASIC20.21■□□□□ 0.83
PDX1P52945 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.21■□□□□ 0.83
PDX1P52945 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.21■□□□□ 0.83
PDX1P52945 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.21■□□□□ 0.83
PDX1P52945 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDX1P52945 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDX1P52945 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
PDX1P52945 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDX1P52945 AC061975.6-201ENST00000579045 1553 ntBASIC20.21■□□□□ 0.83
PDX1P52945 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDX1P52945 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDX1P52945 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.2■□□□□ 0.82
PDX1P52945 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDX1P52945 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDX1P52945 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDX1P52945 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDX1P52945 RPS2P52-201ENST00000469610 820 ntBASIC20.2■□□□□ 0.82
PDX1P52945 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.2■□□□□ 0.82
PDX1P52945 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDX1P52945 AC243732.1-201ENST00000612648 864 ntBASIC20.2■□□□□ 0.82
PDX1P52945 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.2■□□□□ 0.82
PDX1P52945 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.2■□□□□ 0.82
PDX1P52945 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PDX1P52945 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDX1P52945 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDX1P52945 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDX1P52945 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDX1P52945 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDX1P52945 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
PDX1P52945 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDX1P52945 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDX1P52945 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.2■□□□□ 0.82
PDX1P52945 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.19■□□□□ 0.82
PDX1P52945 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDX1P52945 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.19■□□□□ 0.82
PDX1P52945 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDX1P52945 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDX1P52945 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDX1P52945 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDX1P52945 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PDX1P52945 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.19■□□□□ 0.82
PDX1P52945 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.19■□□□□ 0.82
PDX1P52945 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.19■□□□□ 0.82
PDX1P52945 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.19■□□□□ 0.82
PDX1P52945 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDX1P52945 AL591742.1-201ENST00000604433 565 ntBASIC20.19■□□□□ 0.82
PDX1P52945 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDX1P52945 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.19■□□□□ 0.82
PDX1P52945 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDX1P52945 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PDX1P52945 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDX1P52945 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDX1P52945 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.18■□□□□ 0.82
PDX1P52945 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.18■□□□□ 0.82
PDX1P52945 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.18■□□□□ 0.82
PDX1P52945 DUSP5P2-201ENST00000426873 1033 ntBASIC20.18■□□□□ 0.82
PDX1P52945 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.18■□□□□ 0.82
PDX1P52945 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.18■□□□□ 0.82
PDX1P52945 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.18■□□□□ 0.82
PDX1P52945 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.18■□□□□ 0.82
PDX1P52945 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.18■□□□□ 0.82
PDX1P52945 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDX1P52945 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDX1P52945 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDX1P52945 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDX1P52945 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.17■□□□□ 0.82
PDX1P52945 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDX1P52945 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.17■□□□□ 0.82
PDX1P52945 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDX1P52945 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDX1P52945 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.17■□□□□ 0.82
PDX1P52945 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.17■□□□□ 0.82
PDX1P52945 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.17■□□□□ 0.82
PDX1P52945 AC097658.1-201ENST00000475555 843 ntBASIC20.17■□□□□ 0.82
PDX1P52945 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PDX1P52945 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDX1P52945 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDX1P52945 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PDX1P52945 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.17■□□□□ 0.82
PDX1P52945 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.17■□□□□ 0.82
PDX1P52945 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.17■□□□□ 0.82
PDX1P52945 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.17■□□□□ 0.82
PDX1P52945 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDX1P52945 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDX1P52945 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PDX1P52945 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PDX1P52945 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PDX1P52945 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDX1P52945 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PDX1P52945 ESRRAP1-201ENST00000400596 1257 ntBASIC20.16■□□□□ 0.82
PDX1P52945 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.16■□□□□ 0.82
PDX1P52945 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDX1P52945 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.16■□□□□ 0.82
PDX1P52945 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDX1P52945 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDX1P52945 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.16■□□□□ 0.82
PDX1P52945 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDX1P52945 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PDX1P52945 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms