Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.41■□□□□ 0.7
SMSP52788 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.41■□□□□ 0.7
SMSP52788 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMSP52788 AC011767.1-201ENST00000617410 1153 ntBASIC19.41■□□□□ 0.7
SMSP52788 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.41■□□□□ 0.7
SMSP52788 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMSP52788 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMSP52788 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.41■□□□□ 0.7
SMSP52788 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMSP52788 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.41■□□□□ 0.7
SMSP52788 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.41■□□□□ 0.7
SMSP52788 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMSP52788 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMSP52788 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SMSP52788 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.4■□□□□ 0.7
SMSP52788 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMSP52788 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMSP52788 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMSP52788 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMSP52788 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMSP52788 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMSP52788 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMSP52788 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMSP52788 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.4■□□□□ 0.7
SMSP52788 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMSP52788 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.4■□□□□ 0.7
SMSP52788 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMSP52788 AC079140.4-201ENST00000507448 529 ntBASIC19.4■□□□□ 0.7
SMSP52788 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.4■□□□□ 0.7
SMSP52788 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMSP52788 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SMSP52788 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMSP52788 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMSP52788 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMSP52788 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.4■□□□□ 0.7
SMSP52788 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMSP52788 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMSP52788 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMSP52788 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMSP52788 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMSP52788 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.39■□□□□ 0.69
SMSP52788 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.39■□□□□ 0.69
SMSP52788 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.39■□□□□ 0.69
SMSP52788 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SMSP52788 NCF1B-203ENST00000435988 1254 ntBASIC19.39■□□□□ 0.69
SMSP52788 CROCCP5-201ENST00000436658 830 ntBASIC19.39■□□□□ 0.69
SMSP52788 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.39■□□□□ 0.69
SMSP52788 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.39■□□□□ 0.69
SMSP52788 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.39■□□□□ 0.69
SMSP52788 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.39■□□□□ 0.69
SMSP52788 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.39■□□□□ 0.69
SMSP52788 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMSP52788 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SMSP52788 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMSP52788 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.39■□□□□ 0.69
SMSP52788 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMSP52788 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMSP52788 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMSP52788 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMSP52788 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMSP52788 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMSP52788 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SMSP52788 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMSP52788 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMSP52788 GPX1P1-201ENST00000388829 606 ntBASIC19.38■□□□□ 0.69
SMSP52788 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMSP52788 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMSP52788 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.38■□□□□ 0.69
SMSP52788 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMSP52788 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMSP52788 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMSP52788 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMSP52788 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMSP52788 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SMSP52788 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.37■□□□□ 0.69
SMSP52788 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMSP52788 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SMSP52788 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMSP52788 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMSP52788 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.37■□□□□ 0.69
SMSP52788 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.37■□□□□ 0.69
SMSP52788 OXCT2P1-201ENST00000447263 1535 ntBASIC19.37■□□□□ 0.69
SMSP52788 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMSP52788 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMSP52788 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.37■□□□□ 0.69
SMSP52788 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.37■□□□□ 0.69
SMSP52788 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
SMSP52788 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMSP52788 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
SMSP52788 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.37■□□□□ 0.69
SMSP52788 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMSP52788 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
SMSP52788 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMSP52788 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.36■□□□□ 0.69
SMSP52788 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMSP52788 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMSP52788 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMSP52788 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMSP52788 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.36■□□□□ 0.69
SMSP52788 MIR663A-201ENST00000385250 93 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms