Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1P51610 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HCFC1P51610 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.22■□□□□ 0.51
HCFC1P51610 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1P51610 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.22■□□□□ 0.51
HCFC1P51610 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1P51610 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HCFC1P51610 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
HCFC1P51610 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1P51610 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1P51610 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1P51610 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1P51610 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
HCFC1P51610 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.21■□□□□ 0.51
HCFC1P51610 MCRIP2P1-201ENST00000394346 511 ntBASIC18.21■□□□□ 0.51
HCFC1P51610 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.21■□□□□ 0.51
HCFC1P51610 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1P51610 MIR4497-201ENST00000583208 89 ntBASIC18.21■□□□□ 0.51
HCFC1P51610 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
HCFC1P51610 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.21■□□□□ 0.51
HCFC1P51610 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1P51610 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.21■□□□□ 0.51
HCFC1P51610 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
HCFC1P51610 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HCFC1P51610 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HCFC1P51610 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.2■□□□□ 0.5
HCFC1P51610 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1P51610 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1P51610 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1P51610 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1P51610 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HCFC1P51610 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1P51610 RPPH1-201ENST00000516869 333 ntBASIC18.2■□□□□ 0.5
HCFC1P51610 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.2■□□□□ 0.5
HCFC1P51610 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.2■□□□□ 0.5
HCFC1P51610 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.2■□□□□ 0.5
HCFC1P51610 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
HCFC1P51610 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1P51610 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1P51610 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1P51610 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1P51610 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1P51610 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1P51610 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.2■□□□□ 0.5
HCFC1P51610 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.2■□□□□ 0.5
HCFC1P51610 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
HCFC1P51610 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1P51610 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.2■□□□□ 0.5
HCFC1P51610 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.2■□□□□ 0.5
HCFC1P51610 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1P51610 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HCFC1P51610 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.19■□□□□ 0.5
HCFC1P51610 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.19■□□□□ 0.5
HCFC1P51610 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.19■□□□□ 0.5
HCFC1P51610 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HCFC1P51610 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.19■□□□□ 0.5
HCFC1P51610 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.19■□□□□ 0.5
HCFC1P51610 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.19■□□□□ 0.5
HCFC1P51610 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.19■□□□□ 0.5
HCFC1P51610 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
HCFC1P51610 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.19■□□□□ 0.5
HCFC1P51610 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.19■□□□□ 0.5
HCFC1P51610 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC1P51610 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.19■□□□□ 0.5
HCFC1P51610 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC1P51610 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC1P51610 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC1P51610 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC1P51610 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1P51610 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.18■□□□□ 0.5
HCFC1P51610 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1P51610 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1P51610 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.18■□□□□ 0.5
HCFC1P51610 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1P51610 AC012618.2-201ENST00000428058 849 ntBASIC18.18■□□□□ 0.5
HCFC1P51610 AC245052.3-201ENST00000450182 901 ntBASIC18.18■□□□□ 0.5
HCFC1P51610 CDV3P1-201ENST00000471403 739 ntBASIC18.18■□□□□ 0.5
HCFC1P51610 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.18■□□□□ 0.5
HCFC1P51610 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.18■□□□□ 0.5
HCFC1P51610 AC233263.1-201ENST00000578059 224 ntBASIC18.18■□□□□ 0.5
HCFC1P51610 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
HCFC1P51610 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.18■□□□□ 0.5
HCFC1P51610 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HCFC1P51610 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1P51610 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1P51610 EP400NL-214ENST00000641289 2402 ntBASIC18.18■□□□□ 0.5
HCFC1P51610 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1P51610 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HCFC1P51610 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1P51610 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1P51610 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1P51610 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1P51610 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.18■□□□□ 0.5
HCFC1P51610 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1P51610 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1P51610 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1P51610 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.18■□□□□ 0.5
HCFC1P51610 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.18■□□□□ 0.5
HCFC1P51610 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1P51610 AC092368.3-202ENST00000574180 1591 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms