Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDK7P50613 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDK7P50613 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDK7P50613 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDK7P50613 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.08■■□□□ 1.29
CDK7P50613 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDK7P50613 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.08■■□□□ 1.29
CDK7P50613 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.08■■□□□ 1.29
CDK7P50613 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.08■■□□□ 1.29
CDK7P50613 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.08■■□□□ 1.29
CDK7P50613 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.08■■□□□ 1.29
CDK7P50613 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDK7P50613 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
CDK7P50613 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CDK7P50613 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CDK7P50613 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CDK7P50613 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDK7P50613 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDK7P50613 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDK7P50613 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
CDK7P50613 AC211429.1-201ENST00000415277 523 ntBASIC23.07■■□□□ 1.28
CDK7P50613 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.07■■□□□ 1.28
CDK7P50613 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.07■■□□□ 1.28
CDK7P50613 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.07■■□□□ 1.28
CDK7P50613 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.07■■□□□ 1.28
CDK7P50613 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CDK7P50613 REXO1L12P-201ENST00000622156 912 ntBASIC23.07■■□□□ 1.28
CDK7P50613 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.07■■□□□ 1.28
CDK7P50613 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
CDK7P50613 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.07■■□□□ 1.28
CDK7P50613 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.07■■□□□ 1.28
CDK7P50613 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDK7P50613 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CDK7P50613 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDK7P50613 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDK7P50613 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CDK7P50613 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDK7P50613 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDK7P50613 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CDK7P50613 SNORA78-201ENST00000459373 127 ntBASIC23.06■■□□□ 1.28
CDK7P50613 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDK7P50613 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDK7P50613 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDK7P50613 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.06■■□□□ 1.28
CDK7P50613 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
CDK7P50613 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.06■■□□□ 1.28
CDK7P50613 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDK7P50613 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.06■■□□□ 1.28
CDK7P50613 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CDK7P50613 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CDK7P50613 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDK7P50613 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDK7P50613 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDK7P50613 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDK7P50613 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDK7P50613 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDK7P50613 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDK7P50613 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.05■■□□□ 1.28
CDK7P50613 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.05■■□□□ 1.28
CDK7P50613 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDK7P50613 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.05■■□□□ 1.28
CDK7P50613 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDK7P50613 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.05■■□□□ 1.28
CDK7P50613 AC069544.1-201ENST00000609399 999 ntBASIC23.05■■□□□ 1.28
CDK7P50613 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDK7P50613 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDK7P50613 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.05■■□□□ 1.28
CDK7P50613 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.05■■□□□ 1.28
CDK7P50613 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDK7P50613 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
CDK7P50613 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDK7P50613 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDK7P50613 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.04■■□□□ 1.28
CDK7P50613 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDK7P50613 FAM210CP-201ENST00000445714 574 ntBASIC23.04■■□□□ 1.28
CDK7P50613 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.04■■□□□ 1.28
CDK7P50613 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
CDK7P50613 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.04■■□□□ 1.28
CDK7P50613 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDK7P50613 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CDK7P50613 SOX15-203ENST00000570788 1093 ntBASIC23.04■■□□□ 1.28
CDK7P50613 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDK7P50613 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.04■■□□□ 1.28
CDK7P50613 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
CDK7P50613 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.04■■□□□ 1.28
CDK7P50613 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.04■■□□□ 1.28
CDK7P50613 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDK7P50613 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CDK7P50613 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDK7P50613 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
CDK7P50613 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDK7P50613 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.03■■□□□ 1.28
CDK7P50613 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDK7P50613 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDK7P50613 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDK7P50613 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDK7P50613 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.03■■□□□ 1.28
CDK7P50613 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CDK7P50613 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.03■■□□□ 1.28
CDK7P50613 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms