Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 IMH1YLR309C 2736 nt4.48□□□□□ -1.69
MSH4P40965 APL4YPR029C 2499 nt4.48□□□□□ -1.69
MSH4P40965 CHL1YPL008W 2586 nt4.48□□□□□ -1.69
MSH4P40965 PEP7YDR323C 1548 nt4.47□□□□□ -1.69
MSH4P40965 AAD16YFL057C 459 nt4.47□□□□□ -1.69
MSH4P40965 YFR010W-AYFR010W-A 189 nt4.47□□□□□ -1.69
MSH4P40965 YKL069WYKL069W 543 nt4.47□□□□□ -1.69
MSH4P40965 AIM32YML050W 936 nt4.47□□□□□ -1.69
MSH4P40965 FSH3YOR280C 801 nt4.47□□□□□ -1.69
MSH4P40965 NCR1YPL006W 3513 nt4.47□□□□□ -1.69
MSH4P40965 snR59snR59 78 nt4.46□□□□□ -1.7
MSH4P40965 ECM4YKR076W 1113 nt4.46□□□□□ -1.7
MSH4P40965 IDP2YLR174W 1239 nt4.46□□□□□ -1.7
MSH4P40965 CMD1YBR109C 444 nt4.46□□□□□ -1.7
MSH4P40965 NRP1YDL167C 2160 nt4.46□□□□□ -1.7
MSH4P40965 PIN4YBL051C 2007 nt4.45□□□□□ -1.7
MSH4P40965 RPS14AYCR031C 414 nt4.45□□□□□ -1.7
MSH4P40965 YHR052W-AYHR052W-A 195 nt4.45□□□□□ -1.7
MSH4P40965 YHR054W-AYHR054W-A 195 nt4.45□□□□□ -1.7
MSH4P40965 YAL063C-AYAL063C-A 291 nt4.45□□□□□ -1.7
MSH4P40965 RIM9YMR063W 720 nt4.45□□□□□ -1.7
MSH4P40965 MCM7YBR202W 2538 nt4.45□□□□□ -1.7
MSH4P40965 ISM1YPL040C 3009 nt4.45□□□□□ -1.7
MSH4P40965 VPS9YML097C 1356 nt4.44□□□□□ -1.7
MSH4P40965 MRPL11YDL202W 750 nt4.44□□□□□ -1.7
MSH4P40965 NHP2YDL208W 471 nt4.44□□□□□ -1.7
MSH4P40965 YFL015CYFL015C 495 nt4.44□□□□□ -1.7
MSH4P40965 CGR1YGL029W 363 nt4.44□□□□□ -1.7
MSH4P40965 YGL063C-AYGL063C-A 150 nt4.44□□□□□ -1.7
MSH4P40965 COX8YLR395C 237 nt4.44□□□□□ -1.7
MSH4P40965 INN1YNL152W 1230 nt4.44□□□□□ -1.7
MSH4P40965 GRE2YOL151W 1029 nt4.44□□□□□ -1.7
MSH4P40965 AFT2YPL202C 1251 nt4.44□□□□□ -1.7
MSH4P40965 NSL1YPL233W 651 nt4.44□□□□□ -1.7
MSH4P40965 SHE4YOR035C 2370 nt4.44□□□□□ -1.7
MSH4P40965 HRD1YOL013C 1656 nt4.44□□□□□ -1.7
MSH4P40965 IMD4YML056C 1575 nt4.44□□□□□ -1.7
MSH4P40965 NCS2YNL119W 1482 nt4.43□□□□□ -1.7
MSH4P40965 SMI1YGR229C 1518 nt4.43□□□□□ -1.7
MSH4P40965 PPQ1YPL179W 1650 nt4.43□□□□□ -1.7
MSH4P40965 NOP15YNL110C 663 nt4.43□□□□□ -1.7
MSH4P40965 YNL184CYNL184C 327 nt4.43□□□□□ -1.7
MSH4P40965 YBR032WYBR032W 303 nt4.43□□□□□ -1.7
MSH4P40965 VIP1YLR410W 3441 nt4.43□□□□□ -1.7
MSH4P40965 AYT1YLL063C 1425 nt4.43□□□□□ -1.7
MSH4P40965 ASI1YMR119W 1875 nt4.43□□□□□ -1.7
MSH4P40965 YDR413CYDR413C 576 nt4.42□□□□□ -1.7
MSH4P40965 MFA1YDR461W 111 nt4.42□□□□□ -1.7
MSH4P40965 YDR537CYDR537C 606 nt4.42□□□□□ -1.7
MSH4P40965 GCN4YEL009C 846 nt4.42□□□□□ -1.7
MSH4P40965 YEL057CYEL057C 702 nt4.42□□□□□ -1.7
MSH4P40965 PDX1YGR193C 1233 nt4.42□□□□□ -1.7
MSH4P40965 YKL068W-AYKL068W-A 237 nt4.42□□□□□ -1.7
MSH4P40965 TDA8YAL064C-A 381 nt4.42□□□□□ -1.7
MSH4P40965 ALG8YOR067C 1734 nt4.42□□□□□ -1.7
MSH4P40965 VAM10YOR068C 345 nt4.42□□□□□ -1.7
MSH4P40965 EBS1YDR206W 2655 nt4.42□□□□□ -1.7
MSH4P40965 ROD1YOR018W 2514 nt4.42□□□□□ -1.7
MSH4P40965 XRS2YDR369C 2565 nt4.42□□□□□ -1.7
MSH4P40965 MCD4YKL165C 2760 nt4.42□□□□□ -1.7
MSH4P40965 ACE2YLR131C 2313 nt4.41□□□□□ -1.7
MSH4P40965 AAD3YCR107W 1092 nt4.41□□□□□ -1.7
MSH4P40965 YER137W-AYER137W-A 306 nt4.41□□□□□ -1.7
MSH4P40965 YGR025WYGR025W 303 nt4.41□□□□□ -1.7
MSH4P40965 AIM26YKL037W 357 nt4.41□□□□□ -1.7
MSH4P40965 YAR029WYAR029W 225 nt4.41□□□□□ -1.7
MSH4P40965 YLR269CYLR269C 351 nt4.41□□□□□ -1.7
MSH4P40965 AVT7YIL088C 1473 nt4.41□□□□□ -1.7
MSH4P40965 RRI2YOL117W 1938 nt4.4□□□□□ -1.7
MSH4P40965 LRG1YDL240W 3054 nt4.4□□□□□ -1.7
MSH4P40965 AHC2YCR082W 387 nt4.4□□□□□ -1.71
MSH4P40965 CPR5YDR304C 678 nt4.4□□□□□ -1.71
MSH4P40965 YDR526CYDR526C 471 nt4.4□□□□□ -1.71
MSH4P40965 Q0092Q0092 141 nt4.4□□□□□ -1.71
MSH4P40965 YER097WYER097W 330 nt4.4□□□□□ -1.71
MSH4P40965 FMP10YER182W 735 nt4.4□□□□□ -1.71
MSH4P40965 YGR073CYGR073C 372 nt4.4□□□□□ -1.71
MSH4P40965 NBL1YHR199C-A 222 nt4.4□□□□□ -1.71
MSH4P40965 YJR111CYJR111C 852 nt4.4□□□□□ -1.71
MSH4P40965 MRPL38YKL170W 417 nt4.4□□□□□ -1.71
MSH4P40965 YLR434CYLR434C 384 nt4.4□□□□□ -1.71
MSH4P40965 OST2YOR103C 393 nt4.4□□□□□ -1.71
MSH4P40965 YOR277CYOR277C 309 nt4.4□□□□□ -1.71
MSH4P40965 MBA1YBR185C 837 nt4.4□□□□□ -1.71
MSH4P40965 YBR209WYBR209W 318 nt4.4□□□□□ -1.71
MSH4P40965 PPZ1YML016C 2079 nt4.4□□□□□ -1.71
MSH4P40965 MTC4YBR255W 2085 nt4.4□□□□□ -1.71
MSH4P40965 SWT1YOR166C 1377 nt4.4□□□□□ -1.71
MSH4P40965 YDR262WYDR262W 819 nt4.39□□□□□ -1.71
MSH4P40965 YLR294CYLR294C 330 nt4.39□□□□□ -1.71
MSH4P40965 UNG1YML021C 1080 nt4.39□□□□□ -1.71
MSH4P40965 JLP2YMR132C 627 nt4.39□□□□□ -1.71
MSH4P40965 LDS2YOL047C 1071 nt4.39□□□□□ -1.71
MSH4P40965 YOR121CYOR121C 306 nt4.39□□□□□ -1.71
MSH4P40965 YNR063WYNR063W 1824 nt4.39□□□□□ -1.71
MSH4P40965 KRE5YOR336W 4098 nt4.39□□□□□ -1.71
MSH4P40965 CHA4YLR098C 1947 nt4.38□□□□□ -1.71
MSH4P40965 TGL3YMR313C 1929 nt4.38□□□□□ -1.71
MSH4P40965 CHD1YER164W 4407 nt4.38□□□□□ -1.71
MSH4P40965 SWI1YPL016W 3945 nt4.38□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms