Protein–RNA interactions for Protein: P38210

LDB7, Chromatin structure-remodeling complex protein RSC14, yeastyeast

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB7P38210 NUP170YBL079W 4509 nt2.27□□□□□ -2.05
LDB7P38210 YKR078WYKR078W 1758 nt2.26□□□□□ -2.05
LDB7P38210 TRS130YMR218C 3309 nt2.26□□□□□ -2.05
LDB7P38210 EDS1YBR033W 2760 nt2.26□□□□□ -2.05
LDB7P38210 YGR111WYGR111W 1203 nt2.26□□□□□ -2.05
LDB7P38210 YHL044WYHL044W 708 nt2.26□□□□□ -2.05
LDB7P38210 TMA10YLR327C 261 nt2.26□□□□□ -2.05
LDB7P38210 YBL108WYBL108W 306 nt2.26□□□□□ -2.05
LDB7P38210 ALG14YBR070C 714 nt2.26□□□□□ -2.05
LDB7P38210 NRG1YDR043C 696 nt2.25□□□□□ -2.05
LDB7P38210 VTC1YER072W 390 nt2.25□□□□□ -2.05
LDB7P38210 YER079C-AYER079C-A 339 nt2.25□□□□□ -2.05
LDB7P38210 YGR050CYGR050C 357 nt2.25□□□□□ -2.05
LDB7P38210 ARC18YLR370C 537 nt2.25□□□□□ -2.05
LDB7P38210 MER1YNL210W 813 nt2.25□□□□□ -2.05
LDB7P38210 YRO2YBR054W 1035 nt2.25□□□□□ -2.05
LDB7P38210 CCL1YPR025C 1182 nt2.25□□□□□ -2.05
LDB7P38210 SAP190YKR028W 3102 nt2.25□□□□□ -2.05
LDB7P38210 YNL018CYNL018C 1839 nt2.24□□□□□ -2.05
LDB7P38210 UTP15YMR093W 1542 nt2.24□□□□□ -2.05
LDB7P38210 YIL046W-AYIL046W-A 165 nt2.24□□□□□ -2.05
LDB7P38210 YIL141WYIL141W 390 nt2.24□□□□□ -2.05
LDB7P38210 YKL065W-AYKL065W-A 222 nt2.24□□□□□ -2.05
LDB7P38210 YOL118CYOL118C 309 nt2.24□□□□□ -2.05
LDB7P38210 YOR277CYOR277C 309 nt2.24□□□□□ -2.05
LDB7P38210 TMA64YDR117C 1698 nt2.24□□□□□ -2.05
LDB7P38210 ROY1YMR258C 1662 nt2.24□□□□□ -2.05
LDB7P38210 MLH1YMR167W 2310 nt2.24□□□□□ -2.05
LDB7P38210 SCY1YGL083W 2415 nt2.23□□□□□ -2.05
LDB7P38210 TRM82YDR165W 1335 nt2.23□□□□□ -2.05
LDB7P38210 MRP10YDL045W-A 288 nt2.23□□□□□ -2.05
LDB7P38210 BI3Q0115 1554 nt2.23□□□□□ -2.05
LDB7P38210 FUS1YCL027W 1539 nt2.22□□□□□ -2.05
LDB7P38210 SPF1YEL031W 3648 nt2.22□□□□□ -2.05
LDB7P38210 RRI1YDL216C 1323 nt2.22□□□□□ -2.05
LDB7P38210 YRB1YDR002W 606 nt2.22□□□□□ -2.05
LDB7P38210 YFR054CYFR054C 579 nt2.22□□□□□ -2.05
LDB7P38210 YAL042C-AYAL042C-A 378 nt2.22□□□□□ -2.05
LDB7P38210 HOT13YKL084W 351 nt2.22□□□□□ -2.05
LDB7P38210 GAB1YLR459W 1185 nt2.22□□□□□ -2.05
LDB7P38210 MRPL40YPL173W 894 nt2.22□□□□□ -2.05
LDB7P38210 snR191snR191 274 nt2.22□□□□□ -2.05
LDB7P38210 CBP6YBR120C 489 nt2.22□□□□□ -2.05
LDB7P38210 CLN3YAL040C 1743 nt2.22□□□□□ -2.05
LDB7P38210 HOS4YIL112W 3252 nt2.21□□□□□ -2.06
LDB7P38210 snR76snR76 109 nt2.21□□□□□ -2.06
LDB7P38210 DPP1YDR284C 870 nt2.21□□□□□ -2.06
LDB7P38210 YDR336WYDR336W 945 nt2.21□□□□□ -2.06
LDB7P38210 YER107W-AYER107W-A 321 nt2.21□□□□□ -2.06
LDB7P38210 YMR31YFR049W 372 nt2.21□□□□□ -2.06
LDB7P38210 YGL039WYGL039W 1047 nt2.21□□□□□ -2.06
LDB7P38210 YGR293CYGR293C 462 nt2.21□□□□□ -2.06
LDB7P38210 AYR1YIL124W 894 nt2.21□□□□□ -2.06
LDB7P38210 YJL202CYJL202C 348 nt2.21□□□□□ -2.06
LDB7P38210 CCE1YKL011C 1062 nt2.21□□□□□ -2.06
LDB7P38210 YNL046WYNL046W 519 nt2.21□□□□□ -2.06
LDB7P38210 KTI11YBL071W-A 249 nt2.21□□□□□ -2.06
LDB7P38210 RPL25YOL127W 429 nt2.21□□□□□ -2.06
LDB7P38210 YPL135C-AYPL135C-A 174 nt2.21□□□□□ -2.06
LDB7P38210 NPR3YHL023C 3441 nt2.2□□□□□ -2.06
LDB7P38210 TFC3YAL001C 3483 nt2.2□□□□□ -2.06
LDB7P38210 UBC9YDL064W 474 nt2.2□□□□□ -2.06
LDB7P38210 YFH1YDL120W 525 nt2.2□□□□□ -2.06
LDB7P38210 SEC4YFL005W 648 nt2.2□□□□□ -2.06
LDB7P38210 PPE1YHR075C 1203 nt2.2□□□□□ -2.06
LDB7P38210 YIL012WYIL012W 342 nt2.2□□□□□ -2.06
LDB7P38210 YJL114WYJL114W 681 nt2.2□□□□□ -2.06
LDB7P38210 NYV1YLR093C 762 nt2.2□□□□□ -2.06
LDB7P38210 YLR169WYLR169W 354 nt2.2□□□□□ -2.06
LDB7P38210 DYN3YMR299C 939 nt2.2□□□□□ -2.06
LDB7P38210 FMP41YNL168C 780 nt2.2□□□□□ -2.06
LDB7P38210 DGK1YOR311C 873 nt2.2□□□□□ -2.06
LDB7P38210 SRB4YER022W 2064 nt2.19□□□□□ -2.06
LDB7P38210 YEL1YBL060W 2064 nt2.19□□□□□ -2.06
LDB7P38210 PEX4YGR133W 552 nt2.19□□□□□ -2.06
LDB7P38210 MRP49YKL167C 414 nt2.19□□□□□ -2.06
LDB7P38210 INO80YGL150C 4470 nt2.19□□□□□ -2.06
LDB7P38210 YBL005W-BYBL005W-B 5268 nt2.19□□□□□ -2.06
LDB7P38210 HRD3YLR207W 2502 nt2.19□□□□□ -2.06
LDB7P38210 YCT1YLL055W 1596 nt2.19□□□□□ -2.06
LDB7P38210 RGL1YPL066W 1440 nt2.18□□□□□ -2.06
LDB7P38210 SSD1YDR293C 3753 nt2.18□□□□□ -2.06
LDB7P38210 SSE1YPL106C 2082 nt2.18□□□□□ -2.06
LDB7P38210 COG2YGR120C 789 nt2.18□□□□□ -2.06
LDB7P38210 PET191YJR034W 327 nt2.18□□□□□ -2.06
LDB7P38210 VPS51YKR020W 495 nt2.18□□□□□ -2.06
LDB7P38210 RPL36AYMR194W 303 nt2.18□□□□□ -2.06
LDB7P38210 YNL089CYNL089C 477 nt2.18□□□□□ -2.06
LDB7P38210 ATP3YBR039W 936 nt2.18□□□□□ -2.06
LDB7P38210 NOP12YOL041C 1380 nt2.18□□□□□ -2.06
LDB7P38210 PUF4YGL014W 2667 nt2.18□□□□□ -2.06
LDB7P38210 AEP1YMR064W 1557 nt2.18□□□□□ -2.06
LDB7P38210 YGL176CYGL176C 1665 nt2.18□□□□□ -2.06
LDB7P38210 UTP22YGR090W 3714 nt2.18□□□□□ -2.06
LDB7P38210 INP51YIL002C 2841 nt2.18□□□□□ -2.06
LDB7P38210 NUP100YKL068W 2880 nt2.17□□□□□ -2.06
LDB7P38210 FUS2YMR232W 2034 nt2.17□□□□□ -2.06
LDB7P38210 TRA1YHR099W 11235 nt2.17□□□□□ -2.06
LDB7P38210 GCN4YEL009C 846 nt2.17□□□□□ -2.06
LDB7P38210 TIM9YEL020W-A 264 nt2.17□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 24.7 ms