Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
KRT20P35900 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.67■□□□□ 0.74
KRT20P35900 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT20P35900 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT20P35900 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT20P35900 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT20P35900 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
KRT20P35900 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT20P35900 AC079140.4-201ENST00000507448 529 ntBASIC19.67■□□□□ 0.74
KRT20P35900 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.67■□□□□ 0.74
KRT20P35900 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.67■□□□□ 0.74
KRT20P35900 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.67■□□□□ 0.74
KRT20P35900 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.67■□□□□ 0.74
KRT20P35900 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT20P35900 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT20P35900 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
KRT20P35900 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
KRT20P35900 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
KRT20P35900 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT20P35900 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT20P35900 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT20P35900 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT20P35900 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT20P35900 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.66■□□□□ 0.74
KRT20P35900 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT20P35900 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRT20P35900 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT20P35900 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
KRT20P35900 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRT20P35900 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT20P35900 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
KRT20P35900 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT20P35900 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT20P35900 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT20P35900 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.66■□□□□ 0.74
KRT20P35900 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRT20P35900 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT20P35900 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT20P35900 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT20P35900 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
KRT20P35900 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT20P35900 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT20P35900 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.66■□□□□ 0.74
KRT20P35900 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT20P35900 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.65■□□□□ 0.74
KRT20P35900 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT20P35900 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.65■□□□□ 0.74
KRT20P35900 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT20P35900 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT20P35900 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT20P35900 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.65■□□□□ 0.74
KRT20P35900 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.65■□□□□ 0.74
KRT20P35900 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.65■□□□□ 0.74
KRT20P35900 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT20P35900 AC055733.4-201ENST00000638462 1354 ntBASIC19.65■□□□□ 0.74
KRT20P35900 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT20P35900 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT20P35900 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.65■□□□□ 0.74
KRT20P35900 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
KRT20P35900 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
KRT20P35900 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT20P35900 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
KRT20P35900 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
KRT20P35900 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT20P35900 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.64■□□□□ 0.73
KRT20P35900 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT20P35900 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT20P35900 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
KRT20P35900 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.64■□□□□ 0.73
KRT20P35900 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.64■□□□□ 0.73
KRT20P35900 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.64■□□□□ 0.73
KRT20P35900 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT20P35900 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
KRT20P35900 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT20P35900 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
KRT20P35900 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
KRT20P35900 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT20P35900 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT20P35900 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT20P35900 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT20P35900 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT20P35900 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT20P35900 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.63■□□□□ 0.73
KRT20P35900 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT20P35900 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT20P35900 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
KRT20P35900 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
KRT20P35900 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT20P35900 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT20P35900 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT20P35900 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.63■□□□□ 0.73
KRT20P35900 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT20P35900 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT20P35900 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
KRT20P35900 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT20P35900 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT20P35900 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT20P35900 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT20P35900 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT20P35900 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms