Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 YKL063CYKL063C 504 nt3.85□□□□□ -1.79
MSH2P25847 YKT6YKL196C 603 nt3.85□□□□□ -1.79
MSH2P25847 YMR052C-AYMR052C-A 366 nt3.85□□□□□ -1.79
MSH2P25847 RSM19YNR037C 276 nt3.85□□□□□ -1.79
MSH2P25847 BUD21YOR078W 645 nt3.85□□□□□ -1.79
MSH2P25847 RAD26YJR035W 3258 nt3.85□□□□□ -1.79
MSH2P25847 GDS1YOR355W 1569 nt3.85□□□□□ -1.79
MSH2P25847 EXO5YBR163W 1758 nt3.84□□□□□ -1.79
MSH2P25847 BNA7YDR428C 786 nt3.84□□□□□ -1.79
MSH2P25847 YDR526CYDR526C 471 nt3.84□□□□□ -1.79
MSH2P25847 AIM4YBR194W 372 nt3.84□□□□□ -1.79
MSH2P25847 SSF1YHR066W 1362 nt3.84□□□□□ -1.79
MSH2P25847 VBA4YDR119W 2307 nt3.84□□□□□ -1.79
MSH2P25847 REG1YDR028C 3045 nt3.84□□□□□ -1.8
MSH2P25847 JEN1YKL217W 1851 nt3.84□□□□□ -1.8
MSH2P25847 MSD1YPL104W 1977 nt3.83□□□□□ -1.8
MSH2P25847 YEL1YBL060W 2064 nt3.83□□□□□ -1.8
MSH2P25847 SWH1YAR042W 3567 nt3.83□□□□□ -1.8
MSH2P25847 YCG1YDR325W 3108 nt3.83□□□□□ -1.8
MSH2P25847 PEX10YDR265W 1014 nt3.83□□□□□ -1.8
MSH2P25847 YGL015CYGL015C 393 nt3.83□□□□□ -1.8
MSH2P25847 YKL044WYKL044W 321 nt3.83□□□□□ -1.8
MSH2P25847 ECM16YMR128W 3804 nt3.83□□□□□ -1.8
MSH2P25847 URB2YJR041C 3525 nt3.82□□□□□ -1.8
MSH2P25847 SET1YHR119W 3243 nt3.82□□□□□ -1.8
MSH2P25847 JJJ2YJL162C 1752 nt3.82□□□□□ -1.8
MSH2P25847 ARP4YJL081C 1470 nt3.82□□□□□ -1.8
MSH2P25847 MAL33YBR297W 1407 nt3.82□□□□□ -1.8
MSH2P25847 YDL009CYDL009C 324 nt3.82□□□□□ -1.8
MSH2P25847 PET54YGR222W 882 nt3.82□□□□□ -1.8
MSH2P25847 ECM4YKR076W 1113 nt3.82□□□□□ -1.8
MSH2P25847 YMR013C-AYMR013C-A 150 nt3.82□□□□□ -1.8
MSH2P25847 RRT16YNL105W 429 nt3.82□□□□□ -1.8
MSH2P25847 YOR169CYOR169C 465 nt3.82□□□□□ -1.8
MSH2P25847 RPB5YBR154C 648 nt3.82□□□□□ -1.8
MSH2P25847 KHA1YJL094C 2622 nt3.82□□□□□ -1.8
MSH2P25847 DBF20YPR111W 1695 nt3.81□□□□□ -1.8
MSH2P25847 STP2YHR006W 1626 nt3.81□□□□□ -1.8
MSH2P25847 XRN1YGL173C 4587 nt3.81□□□□□ -1.8
MSH2P25847 SPT6YGR116W 4356 nt3.81□□□□□ -1.8
MSH2P25847 YDR442WYDR442W 393 nt3.81□□□□□ -1.8
MSH2P25847 YER119C-AYER119C-A 372 nt3.81□□□□□ -1.8
MSH2P25847 BI2Q0110 1272 nt3.81□□□□□ -1.8
MSH2P25847 SEC53YFL045C 765 nt3.81□□□□□ -1.8
MSH2P25847 LIF1YGL090W 1266 nt3.81□□□□□ -1.8
MSH2P25847 YAP3YHL009C 993 nt3.81□□□□□ -1.8
MSH2P25847 YHR028W-AYHR028W-A 321 nt3.81□□□□□ -1.8
MSH2P25847 YMR304C-AYMR304C-A 351 nt3.81□□□□□ -1.8
MSH2P25847 HHF2YNL030W 312 nt3.81□□□□□ -1.8
MSH2P25847 FYV12YOR183W 390 nt3.81□□□□□ -1.8
MSH2P25847 BI4Q0120 1917 nt3.81□□□□□ -1.8
MSH2P25847 PPQ1YPL179W 1650 nt3.81□□□□□ -1.8
MSH2P25847 YKL222CYKL222C 2118 nt3.8□□□□□ -1.8
MSH2P25847 ICR1ICR1 3199 nt3.8□□□□□ -1.8
MSH2P25847 CEP3YMR168C 1827 nt3.8□□□□□ -1.8
MSH2P25847 RPB9YGL070C 369 nt3.8□□□□□ -1.8
MSH2P25847 SRL3YKR091W 741 nt3.8□□□□□ -1.8
MSH2P25847 YLR154W-FYLR154W-F 141 nt3.8□□□□□ -1.8
MSH2P25847 YLR297WYLR297W 390 nt3.8□□□□□ -1.8
MSH2P25847 YHC1YLR298C 696 nt3.8□□□□□ -1.8
MSH2P25847 TOM22YNL131W 459 nt3.8□□□□□ -1.8
MSH2P25847 IGO1YNL157W 507 nt3.8□□□□□ -1.8
MSH2P25847 PFY1YOR122C 381 nt3.8□□□□□ -1.8
MSH2P25847 SSP1YHR184W 1716 nt3.8□□□□□ -1.8
MSH2P25847 SPO23YBR250W 1572 nt3.8□□□□□ -1.8
MSH2P25847 MSH2YOL090W 2895 nt3.8□□□□□ -1.8
MSH2P25847 RPN2YIL075C 2838 nt3.8□□□□□ -1.8
MSH2P25847 YDR157WYDR157W 402 nt3.79□□□□□ -1.8
MSH2P25847 YER084W-AYER084W-A 513 nt3.79□□□□□ -1.8
MSH2P25847 FMP32YFL046W 624 nt3.79□□□□□ -1.8
MSH2P25847 YGR051CYGR051C 324 nt3.79□□□□□ -1.8
MSH2P25847 YHR175W-AYHR175W-A 150 nt3.79□□□□□ -1.8
MSH2P25847 RPI1YIL119C 1224 nt3.79□□□□□ -1.8
MSH2P25847 CTK3YML112W 891 nt3.79□□□□□ -1.8
MSH2P25847 SCD6YPR129W 1050 nt3.79□□□□□ -1.8
MSH2P25847 RPS23BYPR132W 438 nt3.79□□□□□ -1.8
MSH2P25847 ELM1YKL048C 1923 nt3.79□□□□□ -1.8
MSH2P25847 NOG1YPL093W 1944 nt3.79□□□□□ -1.8
MSH2P25847 PBS2YJL128C 2007 nt3.78□□□□□ -1.8
MSH2P25847 SLA1YBL007C 3735 nt3.78□□□□□ -1.8
MSH2P25847 MNT3YIL014W 1893 nt3.78□□□□□ -1.8
MSH2P25847 MIX14YDR031W 366 nt3.78□□□□□ -1.8
MSH2P25847 RPS23AYGR118W 438 nt3.78□□□□□ -1.8
MSH2P25847 YJL127C-BYJL127C-B 159 nt3.78□□□□□ -1.8
MSH2P25847 COQ5YML110C 924 nt3.78□□□□□ -1.8
MSH2P25847 YNR021WYNR021W 1215 nt3.78□□□□□ -1.8
MSH2P25847 YOL085W-AYOL085W-A 213 nt3.78□□□□□ -1.8
MSH2P25847 YPR012WYPR012W 255 nt3.78□□□□□ -1.8
MSH2P25847 YPR050CYPR050C 414 nt3.78□□□□□ -1.8
MSH2P25847 RRG8YPR116W 834 nt3.78□□□□□ -1.8
MSH2P25847 YPR170W-AYPR170W-A 186 nt3.78□□□□□ -1.8
MSH2P25847 YBR209WYBR209W 318 nt3.78□□□□□ -1.8
MSH2P25847 STU1YBL034C 4542 nt3.78□□□□□ -1.8
MSH2P25847 APE2YKL157W 2859 nt3.78□□□□□ -1.8
MSH2P25847 ROD1YOR018W 2514 nt3.78□□□□□ -1.8
MSH2P25847 ERG5YMR015C 1617 nt3.77□□□□□ -1.81
MSH2P25847 YCR090CYCR090C 549 nt3.77□□□□□ -1.81
MSH2P25847 YER091C-AYER091C-A 222 nt3.77□□□□□ -1.81
MSH2P25847 ECL1YGR146C 636 nt3.77□□□□□ -1.81
MSH2P25847 YGR242WYGR242W 309 nt3.77□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms