Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LCATP04180 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LCATP04180 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LCATP04180 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LCATP04180 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LCATP04180 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LCATP04180 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LCATP04180 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCATP04180 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCATP04180 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCATP04180 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.13■□□□□ 0.49
LCATP04180 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCATP04180 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.13■□□□□ 0.49
LCATP04180 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LCATP04180 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCATP04180 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCATP04180 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.13■□□□□ 0.49
LCATP04180 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.13■□□□□ 0.49
LCATP04180 POU5F1P4-201ENST00000413175 1085 ntBASIC18.13■□□□□ 0.49
LCATP04180 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.13■□□□□ 0.49
LCATP04180 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.13■□□□□ 0.49
LCATP04180 KRT18P14-201ENST00000534205 1250 ntBASIC18.13■□□□□ 0.49
LCATP04180 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.13■□□□□ 0.49
LCATP04180 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCATP04180 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCATP04180 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCATP04180 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.13■□□□□ 0.49
LCATP04180 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCATP04180 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
LCATP04180 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LCATP04180 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCATP04180 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.12■□□□□ 0.49
LCATP04180 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCATP04180 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.12■□□□□ 0.49
LCATP04180 AC138907.5-202ENST00000569484 235 ntBASIC18.12■□□□□ 0.49
LCATP04180 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.12■□□□□ 0.49
LCATP04180 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LCATP04180 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCATP04180 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCATP04180 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.12■□□□□ 0.49
LCATP04180 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LCATP04180 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.12■□□□□ 0.49
LCATP04180 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCATP04180 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LCATP04180 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.11■□□□□ 0.49
LCATP04180 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCATP04180 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCATP04180 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LCATP04180 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCATP04180 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCATP04180 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LCATP04180 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.11■□□□□ 0.49
LCATP04180 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LCATP04180 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.11■□□□□ 0.49
LCATP04180 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.11■□□□□ 0.49
LCATP04180 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.11■□□□□ 0.49
LCATP04180 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.11■□□□□ 0.49
LCATP04180 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.11■□□□□ 0.49
LCATP04180 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.11■□□□□ 0.49
LCATP04180 AC104187.1-201ENST00000607510 612 ntBASIC18.11■□□□□ 0.49
LCATP04180 AC120498.10-201ENST00000621827 505 ntBASIC18.11■□□□□ 0.49
LCATP04180 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.11■□□□□ 0.49
LCATP04180 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCATP04180 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCATP04180 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCATP04180 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCATP04180 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCATP04180 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCATP04180 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LCATP04180 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCATP04180 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LCATP04180 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.1■□□□□ 0.49
LCATP04180 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.1■□□□□ 0.49
LCATP04180 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
LCATP04180 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCATP04180 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCATP04180 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.1■□□□□ 0.49
LCATP04180 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCATP04180 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCATP04180 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LCATP04180 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.1■□□□□ 0.49
LCATP04180 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCATP04180 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.1■□□□□ 0.49
LCATP04180 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.1■□□□□ 0.49
LCATP04180 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.1■□□□□ 0.49
LCATP04180 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LCATP04180 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCATP04180 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LCATP04180 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LCATP04180 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LCATP04180 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LCATP04180 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LCATP04180 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.09■□□□□ 0.49
LCATP04180 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCATP04180 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LCATP04180 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LCATP04180 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LCATP04180 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LCATP04180 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.09■□□□□ 0.49
LCATP04180 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms