Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFP01375 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFP01375 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TNFP01375 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFP01375 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TNFP01375 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TNFP01375 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFP01375 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TNFP01375 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFP01375 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TNFP01375 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.35■□□□□ 0.85
TNFP01375 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TNFP01375 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.35■□□□□ 0.85
TNFP01375 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.35■□□□□ 0.85
TNFP01375 FAM201B-201ENST00000458407 597 ntBASIC20.35■□□□□ 0.85
TNFP01375 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.35■□□□□ 0.85
TNFP01375 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.35■□□□□ 0.85
TNFP01375 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TNFP01375 CYP2T3P-201ENST00000601990 817 ntBASIC20.35■□□□□ 0.85
TNFP01375 MYC-209ENST00000641252 345 ntBASIC20.35■□□□□ 0.85
TNFP01375 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.35■□□□□ 0.85
TNFP01375 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TNFP01375 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFP01375 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFP01375 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFP01375 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFP01375 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.34■□□□□ 0.85
TNFP01375 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TNFP01375 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFP01375 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.34■□□□□ 0.85
TNFP01375 MCRIP2P1-201ENST00000394346 511 ntBASIC20.34■□□□□ 0.85
TNFP01375 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFP01375 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.34■□□□□ 0.85
TNFP01375 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TNFP01375 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.34■□□□□ 0.85
TNFP01375 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.34■□□□□ 0.85
TNFP01375 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFP01375 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.34■□□□□ 0.85
TNFP01375 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.34■□□□□ 0.85
TNFP01375 MIR4651-201ENST00000582622 73 ntBASIC20.34■□□□□ 0.85
TNFP01375 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFP01375 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFP01375 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
TNFP01375 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFP01375 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFP01375 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFP01375 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFP01375 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.33■□□□□ 0.85
TNFP01375 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.33■□□□□ 0.85
TNFP01375 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
TNFP01375 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFP01375 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFP01375 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFP01375 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TNFP01375 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFP01375 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFP01375 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFP01375 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TNFP01375 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFP01375 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.33■□□□□ 0.85
TNFP01375 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.33■□□□□ 0.85
TNFP01375 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
TNFP01375 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFP01375 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFP01375 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFP01375 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.32■□□□□ 0.84
TNFP01375 AC116050.2-201ENST00000612102 1779 ntBASIC20.32■□□□□ 0.84
TNFP01375 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFP01375 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFP01375 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFP01375 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.32■□□□□ 0.84
TNFP01375 AC083880.1-201ENST00000608266 535 ntBASIC20.32■□□□□ 0.84
TNFP01375 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFP01375 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFP01375 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.32■□□□□ 0.84
TNFP01375 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
TNFP01375 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFP01375 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFP01375 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFP01375 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFP01375 KRT17P1-201ENST00000399211 1546 ntBASIC20.32■□□□□ 0.84
TNFP01375 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TNFP01375 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.32■□□□□ 0.84
TNFP01375 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFP01375 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFP01375 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFP01375 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFP01375 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFP01375 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TNFP01375 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFP01375 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFP01375 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.31■□□□□ 0.84
TNFP01375 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFP01375 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFP01375 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFP01375 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFP01375 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFP01375 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.31■□□□□ 0.84
TNFP01375 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
TNFP01375 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms