Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC006538.3-201ENST00000612495 578 ntBASIC9.41□□□□□ -0.9
USH2AO75445 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC9.41□□□□□ -0.9
USH2AO75445 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
USH2AO75445 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC9.41□□□□□ -0.9
USH2AO75445 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
USH2AO75445 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
USH2AO75445 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC9.41□□□□□ -0.9
USH2AO75445 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
USH2AO75445 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
USH2AO75445 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC9.41□□□□□ -0.9
USH2AO75445 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC9.41□□□□□ -0.9
USH2AO75445 VPS72-207ENST00000640458 689 ntTSL 5 BASIC9.41□□□□□ -0.9
USH2AO75445 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
USH2AO75445 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
USH2AO75445 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC9.41□□□□□ -0.9
USH2AO75445 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
USH2AO75445 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
USH2AO75445 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC9.4□□□□□ -0.9
USH2AO75445 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC9.4□□□□□ -0.9
USH2AO75445 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC9.4□□□□□ -0.9
USH2AO75445 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC9.4□□□□□ -0.9
USH2AO75445 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC9.4□□□□□ -0.9
USH2AO75445 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
USH2AO75445 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
USH2AO75445 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
USH2AO75445 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC9.4□□□□□ -0.9
USH2AO75445 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC9.4□□□□□ -0.9
USH2AO75445 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC9.4□□□□□ -0.9
USH2AO75445 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC9.4□□□□□ -0.9
USH2AO75445 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC9.4□□□□□ -0.9
USH2AO75445 OR7E47P-201ENST00000546390 1422 ntBASIC9.4□□□□□ -0.9
USH2AO75445 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC9.4□□□□□ -0.9
USH2AO75445 AC061975.6-201ENST00000579045 1553 ntBASIC9.4□□□□□ -0.9
USH2AO75445 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
USH2AO75445 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
USH2AO75445 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
USH2AO75445 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC9.4□□□□□ -0.9
USH2AO75445 AL450487.1-201ENST00000426799 995 ntBASIC9.4□□□□□ -0.9
USH2AO75445 PVRIG2P-201ENST00000435460 978 ntBASIC9.4□□□□□ -0.9
USH2AO75445 TMA16-209ENST00000513272 803 ntTSL 2 BASIC9.4□□□□□ -0.9
USH2AO75445 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC9.4□□□□□ -0.9
USH2AO75445 CLEC4GP1-201ENST00000596555 870 ntBASIC9.4□□□□□ -0.9
USH2AO75445 AC053503.5-201ENST00000601508 636 ntBASIC9.4□□□□□ -0.9
USH2AO75445 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC9.4□□□□□ -0.9
USH2AO75445 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
USH2AO75445 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC9.4□□□□□ -0.9
USH2AO75445 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
USH2AO75445 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
USH2AO75445 AC022211.4-201ENST00000625094 2161 ntBASIC9.4□□□□□ -0.9
USH2AO75445 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
USH2AO75445 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC9.4□□□□□ -0.91
USH2AO75445 MYC-208ENST00000641036 567 ntBASIC9.4□□□□□ -0.91
USH2AO75445 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
USH2AO75445 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
USH2AO75445 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
USH2AO75445 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
USH2AO75445 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 KRASP1-201ENST00000407852 552 ntBASIC9.39□□□□□ -0.91
USH2AO75445 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
USH2AO75445 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC9.39□□□□□ -0.91
USH2AO75445 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC9.39□□□□□ -0.91
USH2AO75445 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
USH2AO75445 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
USH2AO75445 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC9.39□□□□□ -0.91
USH2AO75445 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 BET1L-202ENST00000332865 533 ntTSL 5 BASIC9.39□□□□□ -0.91
USH2AO75445 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 FAM21FP-204ENST00000608637 956 ntBASIC9.39□□□□□ -0.91
USH2AO75445 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
USH2AO75445 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
USH2AO75445 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC9.39□□□□□ -0.91
USH2AO75445 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC9.39□□□□□ -0.91
USH2AO75445 REXO1L10P-201ENST00000615707 1290 ntBASIC9.39□□□□□ -0.91
USH2AO75445 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USH2AO75445 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
USH2AO75445 AL031133.1-201ENST00000406807 723 ntBASIC9.38□□□□□ -0.91
USH2AO75445 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC9.38□□□□□ -0.91
USH2AO75445 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
USH2AO75445 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
USH2AO75445 NXN-202ENST00000537628 1340 ntTSL 3 BASIC9.38□□□□□ -0.91
USH2AO75445 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
USH2AO75445 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
USH2AO75445 COPS8-203ENST00000409334 794 ntTSL 5 BASIC9.38□□□□□ -0.91
USH2AO75445 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC9.38□□□□□ -0.91
USH2AO75445 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms