Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT3O75175 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT3O75175 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CNOT3O75175 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT3O75175 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CNOT3O75175 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT3O75175 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.06■□□□□ 0.8
CNOT3O75175 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.06■□□□□ 0.8
CNOT3O75175 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.06■□□□□ 0.8
CNOT3O75175 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT3O75175 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CNOT3O75175 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT3O75175 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT3O75175 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.06■□□□□ 0.8
CNOT3O75175 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT3O75175 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CNOT3O75175 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT3O75175 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CNOT3O75175 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CNOT3O75175 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT3O75175 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT3O75175 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CNOT3O75175 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.05■□□□□ 0.8
CNOT3O75175 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.05■□□□□ 0.8
CNOT3O75175 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.05■□□□□ 0.8
CNOT3O75175 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
CNOT3O75175 AC010141.2-201ENST00000452426 721 ntBASIC20.05■□□□□ 0.8
CNOT3O75175 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.05■□□□□ 0.8
CNOT3O75175 AC138907.5-202ENST00000569484 235 ntBASIC20.05■□□□□ 0.8
CNOT3O75175 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT3O75175 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CNOT3O75175 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.05■□□□□ 0.8
CNOT3O75175 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CNOT3O75175 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.05■□□□□ 0.8
CNOT3O75175 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT3O75175 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CNOT3O75175 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.05■□□□□ 0.8
CNOT3O75175 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT3O75175 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CNOT3O75175 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT3O75175 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT3O75175 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT3O75175 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT3O75175 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT3O75175 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT3O75175 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CNOT3O75175 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT3O75175 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CNOT3O75175 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.04■□□□□ 0.8
CNOT3O75175 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT3O75175 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CNOT3O75175 DUX4L16-201ENST00000555130 1264 ntBASIC20.04■□□□□ 0.8
CNOT3O75175 EEF1DP3-203ENST00000566025 782 ntBASIC20.04■□□□□ 0.8
CNOT3O75175 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.04■□□□□ 0.8
CNOT3O75175 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT3O75175 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.04■□□□□ 0.8
CNOT3O75175 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.04■□□□□ 0.8
CNOT3O75175 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CNOT3O75175 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT3O75175 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CNOT3O75175 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT3O75175 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT3O75175 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.03■□□□□ 0.8
CNOT3O75175 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.03■□□□□ 0.8
CNOT3O75175 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT3O75175 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CNOT3O75175 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT3O75175 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT3O75175 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT3O75175 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT3O75175 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT3O75175 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT3O75175 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.03■□□□□ 0.8
CNOT3O75175 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CNOT3O75175 MYCNOS-205ENST00000641950 531 ntBASIC20.03■□□□□ 0.8
CNOT3O75175 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT3O75175 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.03■□□□□ 0.8
CNOT3O75175 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.03■□□□□ 0.8
CNOT3O75175 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.03■□□□□ 0.8
CNOT3O75175 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT3O75175 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT3O75175 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT3O75175 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT3O75175 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT3O75175 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT3O75175 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.02■□□□□ 0.8
CNOT3O75175 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT3O75175 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT3O75175 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CNOT3O75175 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT3O75175 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.02■□□□□ 0.8
CNOT3O75175 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT3O75175 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT3O75175 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CNOT3O75175 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.02■□□□□ 0.8
CNOT3O75175 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT3O75175 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT3O75175 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.02■□□□□ 0.8
CNOT3O75175 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.02■□□□□ 0.8
CNOT3O75175 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms