Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 AC245052.3-201ENST00000450182 901 ntBASIC18.52■□□□□ 0.56
TRAF3IP2O43734 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 UBE2DNL-204ENST00000602536 740 ntBASIC18.52■□□□□ 0.56
TRAF3IP2O43734 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
TRAF3IP2O43734 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.52■□□□□ 0.55
TRAF3IP2O43734 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.52■□□□□ 0.55
TRAF3IP2O43734 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAF3IP2O43734 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAF3IP2O43734 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP2O43734 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAF3IP2O43734 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP2O43734 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.51■□□□□ 0.55
TRAF3IP2O43734 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAF3IP2O43734 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAF3IP2O43734 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.51■□□□□ 0.55
TRAF3IP2O43734 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP2O43734 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.51■□□□□ 0.55
TRAF3IP2O43734 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.51■□□□□ 0.55
TRAF3IP2O43734 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAF3IP2O43734 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.51■□□□□ 0.55
TRAF3IP2O43734 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP2O43734 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP2O43734 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP2O43734 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP2O43734 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRAF3IP2O43734 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP2O43734 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP2O43734 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP2O43734 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP2O43734 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.5■□□□□ 0.55
TRAF3IP2O43734 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAF3IP2O43734 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
TRAF3IP2O43734 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP2O43734 MYCNOS-205ENST00000641950 531 ntBASIC18.5■□□□□ 0.55
TRAF3IP2O43734 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP2O43734 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAF3IP2O43734 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAF3IP2O43734 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP2O43734 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP2O43734 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP2O43734 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP2O43734 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms