Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF223E7ERA6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF223E7ERA6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF223E7ERA6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF223E7ERA6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF223E7ERA6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF223E7ERA6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF223E7ERA6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF223E7ERA6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF223E7ERA6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF223E7ERA6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF223E7ERA6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF223E7ERA6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF223E7ERA6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF223E7ERA6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RNF223E7ERA6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF223E7ERA6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF223E7ERA6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF223E7ERA6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF223E7ERA6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF223E7ERA6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF223E7ERA6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RNF223E7ERA6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF223E7ERA6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
RNF223E7ERA6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF223E7ERA6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF223E7ERA6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF223E7ERA6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF223E7ERA6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF223E7ERA6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF223E7ERA6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF223E7ERA6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.28■□□□□ 0.36
RNF223E7ERA6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF223E7ERA6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF223E7ERA6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF223E7ERA6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF223E7ERA6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF223E7ERA6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF223E7ERA6 C11orf96-202ENST00000528572 1834 ntBASIC17.27■□□□□ 0.36
RNF223E7ERA6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF223E7ERA6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF223E7ERA6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF223E7ERA6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF223E7ERA6 AC211429.1-201ENST00000415277 523 ntBASIC17.27■□□□□ 0.36
RNF223E7ERA6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF223E7ERA6 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF223E7ERA6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF223E7ERA6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF223E7ERA6 AC069544.1-201ENST00000609399 999 ntBASIC17.27■□□□□ 0.36
RNF223E7ERA6 REXO1L12P-201ENST00000622156 912 ntBASIC17.27■□□□□ 0.36
RNF223E7ERA6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF223E7ERA6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF223E7ERA6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF223E7ERA6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.27■□□□□ 0.35
RNF223E7ERA6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF223E7ERA6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
RNF223E7ERA6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
RNF223E7ERA6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF223E7ERA6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF223E7ERA6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF223E7ERA6 MIR1224-201ENST00000408193 85 ntBASIC17.26■□□□□ 0.35
RNF223E7ERA6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF223E7ERA6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF223E7ERA6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF223E7ERA6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF223E7ERA6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF223E7ERA6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF223E7ERA6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF223E7ERA6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF223E7ERA6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RNF223E7ERA6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF223E7ERA6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF223E7ERA6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RNF223E7ERA6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF223E7ERA6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF223E7ERA6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF223E7ERA6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF223E7ERA6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF223E7ERA6 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.25■□□□□ 0.35
RNF223E7ERA6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF223E7ERA6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF223E7ERA6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF223E7ERA6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF223E7ERA6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF223E7ERA6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RNF223E7ERA6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF223E7ERA6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF223E7ERA6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RNF223E7ERA6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF223E7ERA6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RNF223E7ERA6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RNF223E7ERA6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF223E7ERA6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RNF223E7ERA6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF223E7ERA6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF223E7ERA6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF223E7ERA6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF223E7ERA6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF223E7ERA6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF223E7ERA6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms