Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.92■■□□□ 1.26
TRIM49BA6NDI0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM49BA6NDI0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM49BA6NDI0 AP004607.4-201ENST00000530158 1459 ntBASIC22.92■■□□□ 1.26
TRIM49BA6NDI0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM49BA6NDI0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
TRIM49BA6NDI0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.91■■□□□ 1.26
TRIM49BA6NDI0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM49BA6NDI0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM49BA6NDI0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.91■■□□□ 1.26
TRIM49BA6NDI0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM49BA6NDI0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM49BA6NDI0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM49BA6NDI0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM49BA6NDI0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
TRIM49BA6NDI0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM49BA6NDI0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.91■■□□□ 1.26
TRIM49BA6NDI0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM49BA6NDI0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
TRIM49BA6NDI0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM49BA6NDI0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
TRIM49BA6NDI0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM49BA6NDI0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM49BA6NDI0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM49BA6NDI0 AP005212.1-201ENST00000581547 1997 ntBASIC22.9■■□□□ 1.26
TRIM49BA6NDI0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM49BA6NDI0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
TRIM49BA6NDI0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
TRIM49BA6NDI0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.9■■□□□ 1.26
TRIM49BA6NDI0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM49BA6NDI0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
TRIM49BA6NDI0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.89■■□□□ 1.26
TRIM49BA6NDI0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TRIM49BA6NDI0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TRIM49BA6NDI0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TRIM49BA6NDI0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
TRIM49BA6NDI0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRIM49BA6NDI0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRIM49BA6NDI0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.89■■□□□ 1.25
TRIM49BA6NDI0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.89■■□□□ 1.25
TRIM49BA6NDI0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRIM49BA6NDI0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRIM49BA6NDI0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.89■■□□□ 1.25
TRIM49BA6NDI0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TRIM49BA6NDI0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM49BA6NDI0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
TRIM49BA6NDI0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM49BA6NDI0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM49BA6NDI0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.88■■□□□ 1.25
TRIM49BA6NDI0 ZNRF2P3-201ENST00000424200 374 ntBASIC22.88■■□□□ 1.25
TRIM49BA6NDI0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM49BA6NDI0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM49BA6NDI0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
TRIM49BA6NDI0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.88■■□□□ 1.25
TRIM49BA6NDI0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM49BA6NDI0 LINC02228-203ENST00000641970 1355 ntBASIC22.88■■□□□ 1.25
TRIM49BA6NDI0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 AC138907.5-202ENST00000569484 235 ntBASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
TRIM49BA6NDI0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 AC027702.1-201ENST00000563810 1770 ntBASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 AC008175.2-201ENST00000612840 297 ntBASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 AC007225.1-201ENST00000566331 1836 ntBASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM49BA6NDI0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM49BA6NDI0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM49BA6NDI0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM49BA6NDI0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM49BA6NDI0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
TRIM49BA6NDI0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
TRIM49BA6NDI0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.85■■□□□ 1.25
TRIM49BA6NDI0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.85■■□□□ 1.25
TRIM49BA6NDI0 AC104187.1-201ENST00000607510 612 ntBASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms