Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 AC010141.2-201ENST00000452426 721 ntBASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 DUX4L2-201ENST00000561772 1275 ntBASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 TERF1P2-201ENST00000583350 1212 ntBASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 DUX4L6-201ENST00000626483 1275 ntBASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 DUX4L1-201ENST00000627662 1275 ntBASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 DUX4L8-201ENST00000629013 1275 ntBASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 DUX4L3-201ENST00000630187 1275 ntBASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 DUX4L7-201ENST00000630678 1275 ntBASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 DUX4L5-201ENST00000630834 1275 ntBASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 PLK5-205ENST00000642079 1969 ntBASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 AC245052.3-201ENST00000450182 901 ntBASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBV6-4A0A1B0GX49 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 KRT18P20-201ENST00000548986 1279 ntBASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 AC011484.1-201ENST00000377652 1995 ntBASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-4A0A1B0GX49 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms